Vidua macroura (Pin-tailed whydah): 128820046
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Entry
128820046 CDS
T11570
Symbol
ARFGEF1
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128820046 (ARFGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vmc04131
]
128820046 (ARFGEF1)
Membrane trafficking [BR:
vmc04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
128820046 (ARFGEF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
BIG2_C
Sec7-like_HUS
DCB
Sec7-like_HDS
Glyco_hydro_3_C
Motif
Other DBs
NCBI-GeneID:
128820046
NCBI-ProteinID:
XP_053856512
LinkDB
All DBs
Position
1:complement(119961449..120046837)
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AA seq
1843 aa
AA seq
DB search
MYEGKKTKNMFLTRALEKILADKEVKKAHHSQLRKACEVALEEIKAETEKQSPPHGEAKS
GSSTLPPVKSKTSFIEADKYFLPFELACQSKCPRIVSTSLDCLQKLIAYGHLTGNAPDST
APGKKLIDRIIETICGCFQGPQTDEGVQLQIIKALLTAVTSQHIEIHEGTVLQAVRTCYN
IYLASKNLINQTTAKATLTQMLNVIFARMENQALQEAKQMEKERHRQQHHLQQSPVSHHE
PESPQLRHIPAQADQLSKDHERELDHSTNDVDKNLQEDIEAENGSDISSAENEQTEADQA
TAAENLSKADGETYDGESNECEEKAQEIVESIVQEMVNIVVGDVEGTAGGDGTTVSLEDG
SDSENIQANGIPGTPISVAYTPSLPDDRLSVSSNDTQESGNSSGPTPGAKFSHILQKDAF
LVFRSLCKLSMKPLSDGPPDPKSHELRSKILSLQLLLSILQNAGPVFRTNEMFINAIKQY
LCVALSKNGVSSVPEVFELSLSIFLTLLSNFKTHLKMQIEVFFKEIFLYILETSTSSFDH
KWMVIQTLTRICADAQSVVDIYVNYDCDLNAANIFERLVNDLSKIAQGRGSQELGMSNVQ
ELSLRKKGLECLVSILKCMVEWSKDQYVNPNSQTTLGQEKPTEQDSSETKHPETINRYGS
LNSLDSTASSGIGSYSTQMSGTDNPEQFEVLKQQKEIIEQGIDLFNKKPKRGIQYLQEQG
MLGTTPEDIAQFLHQEERLDSTQVGEFLGDNDKFNKEVMYAYVDQHDFSGKDFVSALRMF
LEGFRLPGEAQKIDRLMEKFAARYLECNQGQTLFASADTAYVLAYSIIMLTTDLHSPQVK
NKMTKEQYIKMNRGINDSKDLPEEYLSAIYNEIAGKKISMKETKELTIPTKSTKQSVASE
KQRRLLYNLEMEQMAKTAKALMEAVSHVQAPFTSATHLEHVRPMFKLAWTPFLAAFSVGL
QDCDDTEVASLCLEGIRCAIRIACIFNIQLERDAYVQALARFTLLTVSSGITEMKQKNID
TIKTLITVAHTDGNYLGNSWHEILKCISQLELAQLIGTGVKPRYISGTVRGREGSFTGTK
DQAPDEFVGLGLVGGNVDWKQIASIQESIGETSSQSVVVAVDRIFTGSTRLDGNAIVDFV
RWLCAVSMDELLSATHPRMFSLQKIVEISYYNMGRIRLQWSRIWEVIGDHFNKVGCNPNE
DVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIMKRNRSPTIRDMVVRCIAQMV
NSQAANIRSGWKNIFSVFHLAASDQDESIVELAFQTTGHIVTIVFEKHFPATIDSFQDAV
KCLSEFACNAAFPDTSMEAIRLIRHCAKYVSDRPQAFKEYTSDDMNVAPEDRVWVRGWFP
ILFELSCIINRCKLDVRTRGLTVMFEIMKTYGHTYEKHWWQDLFRIVFRIFDNMKLPEQQ
TEKAEWMTTTCNHALYAICDVFTQYLEVLSDVLLDDIFAQLYWCVQQDNEQLARSGTNCL
ENVVILNGEKFTLEIWDKTCTCMLDIFKTTIPHALLTWRPVGGEFCCGSPSDAKEKLDTI
SQKSVDIHDSIQPRSSDGRPYQPSTGATVAEETSKARPAAKFPEQKLFAALLIKCVVQLE
LIQTIDNIVFFPATSKKEDAENLAAAQRDAVDFDVHVDTQDQGMYRFLTSQQLFKLLDCL
LESHRFAKAFNSNNEQRTALWKAGFKGKSKPNLLKQETSSLACGLRILFRMYMDESRTSA
WEEVQQRLLNVCSEALSYFLTLTSESHREAWTNLLLLFLTKVLKISDERFKAHASFYYPL
LCEIMQFDLIPELRAVLRRFFLRIGVVFQISQPPEQESGISKH
NT seq
5532 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaagggaagaagacgaaaaacatgtttctgacccgggccctggagaagatcctg
gccgacaaggaggtgaagaaggcgcatcactcccagctgcgcaaagcctgcgaggtggca
ctagaggaaataaaggctgaaacagaaaagcaaagtccccctcatggagaagcaaagtct
ggttcaagcactcttccacctgtgaaatcaaagacaagcttcattgaagcggacaaatac
ttcctaccatttgaattggcatgccagtccaagtgccccaggattgtcagtacatctcta
gattgtttacagaaacttatagcatatgggcacttgacagggaatgctccagacagtaca
gctccaggaaaaaaactaattgatagaattatcgagacaatatgtggctgttttcaaggc
cctcaaacagacgaaggggttcagctacaaataataaaggctttgctcactgcagtaaca
tctcaacacatagaaatccacgaaggaacagtactacaggctgtaagaacatgttacaat
atctacctagcaagcaaaaatcttataaatcaaactacagccaaggcaactctaacacaa
atgctgaatgtcatttttgcacgtatggaaaatcaagcacttcaggaagccaaacagatg
gaaaaggaaagacacagacagcaacaccatctccagcagtctccagtaagccatcatgag
cctgaatcacctcagttgagacatattccagcacaggctgatcagctgtccaaagaccat
gagagagagcttgaccacagcacaaacgatgtggacaagaaccttcaagaagatattgag
gcagaaaatggatctgacatttctagtgctgaaaacgaacagacagaagctgaccaagcc
acagcagcagaaaatctttctaaagctgatggagaaacgtatgatggtgaaagcaatgag
tgtgaagagaaggcacaagaaattgtagaaagtattgtgcaggaaatggtgaacatagta
gttggagatgtggaaggcactgcaggtggtgatggcacaactgtatcattagaggatggc
agtgacagcgaaaacattcaggcaaatggaattccagggactccaatttctgttgcttat
acaccatctttacccgatgacagattatctgtctcttccaacgatactcaggaatctgga
aattcttcaggacctacccctggtgctaagttttcccacattttacaaaaggatgccttc
cttgtattcaggtcactgtgtaaactctccatgaagcccctgtcagatggaccaccagat
ccaaaatctcatgaactgcggtcaaagattctttcattgcagttgcttctgtccattctg
caaaatgcaggaccagtcttcaggacaaatgagatgttcattaatgctataaagcagtac
ctctgtgttgcactgtcaaaaaatggagtctcatcagttccagaagtttttgaactttca
ctttccatatttcttaccctcctgtcaaactttaagactcatctaaagatgcaaattgag
gttttcttcaaagaaattttcctgtatatcttggaaacttctactagctcatttgatcat
aagtggatggttatacaaacgctgacacggatatgtgcagatgctcagagcgtggtggac
atatacgtgaactatgattgcgatttaaatgcagcaaatatatttgaaaggctggttaat
gacttatcaaagattgctcaaggaaggggtagccaagaacttggcatgtccaatgttcag
gaattaagtttgaggaaaaaaggattggaatgcttagtatcaatcttgaaatgcatggtg
gagtggagtaaggatcaatatgtaaatcccaattcccagacaacccttggccaagaaaaa
cccacagaacaggacagcagtgaaaccaaacaccctgagacaattaacagatatggaagc
ttaaattctttggattctactgcttcatcaggaattggcagttacagcacacagatgtcc
ggcactgacaacccagagcagtttgaagtcctaaagcagcaaaaggaaataatagaacaa
ggaattgacttattcaacaagaaaccaaagagggggattcagtacctgcaagaacaagga
atgcttggcactacccctgaagatattgctcaattcttgcatcaagaggaaagattagat
tcaactcaggttggggagttcctgggagacaatgataaatttaacaaagaagtcatgtat
gcatatgtagaccaacacgacttttcgggaaaggatttcgtttcagctctgcgcatgttt
ctagaaggatttcgtctaccaggagaagctcaaaaaattgatcgcttaatggagaaattt
gctgctagatatttagaatgtaaccaagggcaaactctttttgctagtgcagatactgct
tatgttttagcttactcaattatcatgttgacaacagatcttcacagtccacaggttaag
aataaaatgacaaaagaacagtatattaaaatgaatagaggtatcaatgacagtaaagat
ctccctgaagaatatttgtctgctatctataatgaaatagctggaaagaagatttcaatg
aaagaaacaaaagaattaacaatacccacaaaatccactaaacaaagtgttgctagtgag
aagcagagaagactcctatataacttggaaatggaacaaatggctaaaacagctaaagct
cttatggaggcagtgagccacgttcaggccccttttaccagtgctacacacctggagcat
gtgagacccatgtttaagttggcatggacacctttcctggctgcattcagtgttggtcta
caggactgtgatgacaccgaagttgcctctctttgtttggagggtatccgatgtgcaatc
cggattgcttgcattttcaacattcagcttgaaagagatgcctatgttcaagcattagca
agatttacattgcttacagtgagttctggtattactgaaatgaagcagaagaacattgac
accattaaaactctcatcacggtggctcatacagatggaaactatttaggaaattcctgg
catgagattctgaaatgcatcagtcagcttgaactggcacagttaataggaactggagta
aaacctcgctacatctcagggacagtgcgtggcagggaaggttcttttactggaacaaaa
gatcaggcacctgatgaatttgtggggctgggactggttggtggaaatgtggattggaag
cagatagcaagtattcaggaatccattggtgaaactagctcccaaagcgttgttgttgct
gtagacagaatatttactggatctacaaggttggatggaaatgctattgtggatttcgtt
cgctggctttgtgctgtgtctatggatgagctgctgtctgctacccaccctcgaatgttt
agtctgcagaagatagtagagatttcttactacaacatgggccggataaggttacagtgg
tctaggatctgggaagttattggcgatcattttaataaggttggctgtaatcccaatgaa
gatgtagctatttttgcagtagactcattaaggcaattgtcaatgaagttcttggaaaaa
ggagaacttgctaatttccgattccagaaggacttcctaagaccatttgaacatatcatg
aagagaaacaggtctcctactattcgagacatggttgtacggtgtattgcacagatggtg
aattcccaggctgctaacattcgttctggctggaaaaacattttttcagtgtttcatctg
gcagcctcagatcaggatgaaagtatagtggaactggcattccagactacaggacacatt
gtcacaatcgtgtttgaaaaacacttcccagcaaccatagattctttccaggatgcagtg
aagtgcttgtctgaatttgcctgcaatgcagcatttccagataccagtatggaagcgatc
cgcctcattcgccactgtgcaaaatatgtgtctgacaggcctcaggcattcaaggaatac
acaagtgatgatatgaatgtagctcctgaagacagagtgtgggtgcgaggatggttccca
attctctttgagttgtcctgtatcatcaatagatgcaaattagatgtaagaaccaggggc
ttaacagtaatgtttgaaataatgaagacatatggccatacttatgaaaaacactggtgg
caagatttgtttcggattgtcttcaggatatttgacaacatgaaactgccagaacagcag
actgagaaagctgaatggatgacaactacttgtaaccatgcactttatgcaatctgtgat
gtatttacacagtatttagaagtacttagtgatgttcttttggatgatatatttgcacag
ctgtactggtgtgtgcagcaagacaatgaacaactggcacgatctggtacaaactgtttg
gagaatgttgtcatccttaatggtgaaaagtttaccctagaaatctgggataaaacctgc
acttgcatgctggatattttcaaaactacaatccctcatgcgctgctgacttggcgaccg
gttggtggggagttctgctgtggctctccctctgatgcaaaagaaaaactggatacaatc
tcccagaagtcggtagatatccatgattccatccagcctcgatcctcagatggacgccca
tatcagcccagcacaggcgccacggtagcagaagaaacgagtaaagccaggccagcagca
aaatttccagaacagaagttatttgctgctcttttgatcaagtgtgttgtacagctggaa
ctcattcagacgatcgacaacattgtgttcttcccagcaactagcaaaaaagaggatgca
gagaatctagcagcagcacaaagagatgcagtagacttcgatgtccatgtggatacacag
gatcaagggatgtatcgtttcctaacatcacaacagcttttcaaacttctcgattgtctg
ctggaatctcacagatttgctaaagcatttaattcaaacaatgaacaaagaactgctctc
tggaaagcaggtttcaaaggcaaatccaagcccaacctgctgaagcaggagacgagcagc
ctggcctgtgggctgcgcatcctgttccgcatgtacatggacgagagccgcaccagtgcc
tgggaggaagtccagcaaagactgctgaatgtctgcagcgaggctctgagctatttcctc
actcttacatcagaaagtcatcgggaagcctggactaaccttttactcttatttttgact
aaagtcttgaagataagtgatgagaggttcaaggcccatgcctcattctactatcctttg
ttgtgtgaaatcatgcagtttgaccttattcctgagcttcgggctgttttgcgaaggttt
ttcctgcggattggtgtggttttccaaatatcccaaccgccagaacaagagtctggaata
agcaagcactag
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integrated database retrieval system
