Vidua macroura (Pin-tailed whydah): 128821761
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Entry
128821761 CDS
T11570
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc03013
Nucleocytoplasmic transport
vmc03015
mRNA surveillance pathway
vmc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128821761 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
128821761 (NCBP1)
03015 mRNA surveillance pathway
128821761 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vmc03019
]
128821761 (NCBP1)
03041 Spliceosome [BR:
vmc03041
]
128821761 (NCBP1)
Messenger RNA biogenesis [BR:
vmc03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
128821761 (NCBP1)
Spliceosome [BR:
vmc03041
]
Common components
Common spliceosomal components
Cap binding complex
128821761 (NCBP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
Importin_rep_6
ApoA-II
Motif
Other DBs
NCBI-GeneID:
128821761
NCBI-ProteinID:
XP_053859024
LinkDB
All DBs
Position
Z:47677266..47707300
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AA seq
794 aa
AA seq
DB search
MSRRRHSDDSDGQPHKRRRTSEPSEIEERLESLICRVGEKSNSSLESNLEGLAGVLEADL
PNYKSKILRILCTVARLLPEKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKECLKVNMY
NEAVHLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRCDWYMFAFLSSLPWVG
KELYEKKDAEMDRLLSQAESYLKRRQKIHVPMLQVWTADKPHPQEEYLDCLWCQIQKLKK
DRWQERHILRPYLAFDSVLCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEGP
VMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLLSYPGNNKIPLNYHIVEVIFAELFQ
LPSPPHIEVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWFSHHL
SNFQFRWSWEDWSDCLTQDLEKPKPKFVREVLEKCMRLSYHQRIIDIVPASFSVLSPANP
VCIYKYGDESNRSLPGYTVALCLTIAIKNKASNDEIFSILKDVPNPNQDDDDGEGFTFNP
LKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVVYEVWKNHPQMI
AVLVDKMIRTQIVDCAAVANWIFSSELAHDFTRFYVWEILHSTIRKMNKHVLKIHKELEE
TKARLARQHKRRDSDDDDDDDDRSTDREDGPLEEQIERLQEKVESAQSEQKNLFLVIFQR
FIMLLTEHLVRCETGGIDVFTPWYKSCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDH
HILAVFQQFCALQA
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcggcggcacagcgacgacagcgatgggcagccccacaagaggcggaggacg
tccgagccgtcggaaattgaggagaggctcgagtcactcatctgcagggtgggagagaag
agtaattcatctttggagagcaacctggagggtctagctggtgttttggaagctgatctg
ccaaattacaaaagcaagatactaagaatactgtgtactgttgcacgtctgctaccagaa
aagcttactgtttacacgacattggtgggcttgctgaatgccaggaactacaattttggt
ggggaatttgtagaagccatgattcgtcagcttaaagaatgtctgaaagtaaacatgtat
aatgaagctgtgcatttagtacgttttctgtccgatctcgtgaattgccatgtaatagct
gcaccttcaatggtagctatgtttgagaactttgtgagtgtgacacaggaggaggacgta
ccccaagtgcgatgtgactggtatatgtttgcatttctgtcatctttgccttgggtcgga
aaggagttatatgagaagaaggatgctgaaatggatcgtctcttgtctcaggcagaaagt
tatctgaaacgccgccagaagattcatgtacccatgctgcaagtgtggactgctgacaaa
ccacatccacaagaagagtatttagactgcctttggtgtcagattcagaaattgaaaaaa
gaccgttggcaggagcggcatatcctgaggccctacttggcttttgacagtgttctctgt
gaggcactgcaacacaatctgcctcccttcacacccccacctcacactgaagattctgta
tacccgatgccaagggttatttttaggatgtttgactacacggatgaccctgagggtcct
gtcatgcctggcagccactctgttgagagatttgtaatagaggagaacctccactgcatc
atcaaatctcactggaaagagagaaagacttgtgctgcacagctgttgagctatccagga
aataacaagatccctttgaactaccatatagtagaggtaatatttgcagagttgtttcaa
ctgccatctccaccacatattgaagtcatgtacacaacgctgctgattgagctgtgcaaa
cttcagcctggctccttaccacaagttcttgcacaagccacagaaatgctctacatgcgt
ttggacacaatgaatacaacatgtgtggacagatttattaactggttttcacaccacttg
agcaactttcagttccgttggagctgggaagactggtcagattgtcttactcaggacctt
gaaaaacccaaacccaaatttgtgagagaagttttggaaaagtgcatgagactctcctac
catcagcgaataatagacattgttcctgcaagtttttctgtcctcagtcctgctaatcca
gtgtgcatttacaaatacggagatgagagcaataggtctcttcctggatatactgtagca
ctctgtttaacaattgcaattaaaaataaggccagcaatgatgaaatcttcagcatttta
aaagatgtacctaatccaaaccaggatgatgatgatggtgaaggatttactttcaaccct
ctgaaaatagaagtctttgttcagactctgctccatctagctgcaaagtcttttagccac
tccttcagcgcccttgcaaagtttcatgaagtcttcaaaacacttgctgaaagtgatgag
gggaagcttcatgttctgagagttgtgtatgaggtttggaagaatcatccacagatgatt
gctgtgcttgtggacaagatgattcggacgcaaattgttgactgtgctgcagtagcaaac
tggatcttttcttcagagctggcacatgattttaccaggttttatgtctgggagatctta
cattccacaattcgtaagatgaataagcatgtcctgaagattcacaaagaactggaggag
accaaagcaagattggccaggcagcacaaaagacgggacagtgatgatgatgatgacgat
gatgaccgaagcactgatcgggaagatggaccactggaagagcagatagagcgcttgcag
gaaaaagtagagtcagcccagagtgagcagaagaatctctttcttgttatattccagcgt
ttcattatgttgttaacggagcacttagtgcgctgtgagacaggtggaattgatgtattt
acaccctggtacaagagctgtatagagaggttgcagcagatcttcctgcagcaccaccag
ataatccagcagtacatggtgacactagagaacctcctgtttacagctgaactggaccac
cacattctggctgtgtttcagcagttctgtgctctgcaggcctga
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