Vidua macroura (Pin-tailed whydah): 128822870
Help
Entry
128822870 CDS
T11570
Symbol
SHMT2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc00260
Glycine, serine and threonine metabolism
vmc00630
Glyoxylate and dicarboxylate metabolism
vmc00670
One carbon pool by folate
vmc01100
Metabolic pathways
vmc01200
Carbon metabolism
vmc01230
Biosynthesis of amino acids
vmc01240
Biosynthesis of cofactors
vmc04981
Folate transport and metabolism
Module
vmc_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
128822870 (SHMT2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
128822870 (SHMT2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
128822870 (SHMT2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
128822870 (SHMT2)
Enzymes [BR:
vmc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
128822870 (SHMT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHMT
EGF_PEAR1L
Motif
Other DBs
NCBI-GeneID:
128822870
NCBI-ProteinID:
XP_053860707
LinkDB
All DBs
Position
Unknown
AA seq
500 aa
AA seq
DB search
MWPLRLGRTLQRWGGRVGTGSQRAQHGPAAAAAGHVPGWTGQESLAESDPEMWSLVQKEK
DRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDQIELLCERRAL
EAFDLDPARWGVNVQPYSGSPANFAAYTALLQPHDRLMGLDLPDGGHLTHGYMTDVKRIS
ATSIFFESMPYKLDPATGLIDYAQLEVTARLFRPRLIIAGTSAYARLIDYARIRRVCEEV
KAYLLADMAHISGLVAAKAIPSPFEHADVVTSTTHKTLRGARAGLIFYRKGVRSVDKKTG
KETLYDLEDRINFSVFPSLQGGPHNHAIAAVAVALKQASSPAFQEYCQQVLRNAKAMARA
LLQRGYTLVSGGTDNHLVLVDLRPKGIDGARAERVLELVSITANKNTCPGDRSALTPGGL
RLGAPALTSRHFREEDFQKVVEFIDEGIALALDVKSKTSKLQDFKTFLLQDPETQRRLSD
LRQRVETFARAFPMPGFSDH
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgtggccgctccgcctgggcaggaccctgcagcgatgggggggccgggtgggcactggc
agccagcgggcacagcacggccccgccgccgccgccgccgggcacgtccccggctggacg
gggcaggagagcctggccgagagcgaccccgaaatgtggagcctggtgcagaaggagaag
gatcggcagtgccgggggctggagctcatcgcctctgagaatttctgcagccgggcggcg
ctggaagccctgggctcctgcctcaacaacaaatactcggaggggtatcctgggaagagg
tactacgggggggccgaggtggtggatcagatcgagctgctgtgcgagcggcgggcgctg
gaagcgttcgacctggaccccgcgcgctggggcgtcaacgtccagccctactcgggctcc
ccggccaacttcgccgcctacacggccctgctgcagccccacgaccgcctgatggggctg
gacctgcccgacgggggccacctcacgcacgggtacatgaccgacgtcaagaggatctcg
gccacctccatcttcttcgagtccatgccctacaagcttgatcccgccacaggactgatt
gactacgcccagctggaggtgacggcgcggctcttccgtccccggctgatcatcgcgggc
accagcgcctacgcccgcctcatcgactacgcccgcatcaggagggtgtgcgaggaggtc
aaggcgtacctgctggccgacatggcccacatcagcgggctggtggcggccaaggccatc
ccgtcgcccttcgagcacgcggacgtggtcaccagcaccacgcacaagaccctgcgtggc
gccagggcgggattgatcttctaccgcaagggcgtgcgctccgtggataagaagacgggc
aaggagaccctctacgacctggaggacaggatcaacttctccgtgttcccctccctgcag
gggggaccccacaaccacgccattgctgccgtggctgtggccctcaaacaggccagctcc
ccagctttccaggagtactgccagcaggtgctgaggaacgccaaggccatggcacgggcg
ctgctgcagcgggggtacaccctggtgtcaggtggcaccgacaaccacctggtgctggtg
gacctgcggcccaagggcatcgacggggcgcgggcagagcgggtgctggagctcgtctcc
atcacggccaacaagaacacgtgcccgggggacaggagcgcgctgacacccggggggctg
cgcctcggtgcccccgcgctgacctcccgccacttccgcgaggaggatttccagaaggtc
gtggagttcatcgacgagggcatcgctctggccctggacgtcaagagcaaaaccagtaag
ctccaggacttcaagaccttcctgctgcaggacccggagacgcagcggcgcctgagcgac
ctccgccagcgcgtcgagaccttcgcccgtgccttccccatgcccggcttcagcgaccac
tga
DBGET
integrated database retrieval system
