Vibrio mimicus: AL543_00405
Help
Entry
AL543_00405 CDS
T04381
Name
(GenBank) CdaR family transcriptional regulator
KO
K02647
carbohydrate diacid regulator
Organism
vmi
Vibrio mimicus
Brite
KEGG Orthology (KO) [BR:
vmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vmi03000
]
AL543_00405
Transcription factors [BR:
vmi03000
]
Prokaryotic type
Helix-turn-helix
Other families
AL543_00405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
HTH_8
DUF2089
ASD2
Motif
Other DBs
NCBI-ProteinID:
AMG01535
UniProt:
A0A1D8SHZ5
LinkDB
All DBs
Position
1:complement(98305..99444)
Genome browser
AA seq
379 aa
AA seq
DB search
MILDAQLAQQIVDRTMAIIGYNINVMNQAGVIIGSGEKKRLGQVHDGAILALKHGDSVEL
TAQSCVSLKGVKPGINMVLRNQQQVVGIVGITGEPDEIRDFANLVKMSAEMIIEQAALVE
QLQWDRRHREEFIFAWINNTLAPSELEAWAARLSIDLSKPRVAVVIAFRQPRSGQSLDQI
RQVVELLEHPERDNLVAVVSMQEIVVLKPCRTPEHWTSEYESLRIDKLMARLKTYDITGY
DIALGQLFLNPNSIHLSYQSAKQVLRIGQVRQPQKHKHLYEELRLPVLLSPLRECWQGEQ
WVSVMTQLQTADRSGQLLRTLDALFKANGNLNECAQSLFIHRNTLRYRLEKITEITGIDT
TSLLGLAELYIAYQLSNFE
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgatcttagatgcgcaacttgcccagcaaattgtcgatcgaaccatggccatcatcggt
tacaacatcaacgtgatgaatcaggcgggggtgatcattggcagcggcgagaaaaaacgc
ttaggtcaggtgcatgatggcgctattttagccttgaagcatggtgattcagtcgaactg
accgcacagagttgtgtgtcactaaaaggtgtgaaaccgggcatcaacatggtgctgcga
aatcagcaacaagtggtgggtattgtcgggattaccggagagccagatgaaatccgcgat
tttgccaacttggtgaaaatgagtgccgagatgatcattgaacaagcggctctggtggaa
cagttgcaatgggaccgaaggcacagagaagagtttatttttgcttggattaacaatacg
ctcgccccttcagagctagaagcatgggctgcaaggctttccattgatttgtcgaaaccg
cgagtcgcggtagtaattgcttttcgccaaccgcgcagtgggcaaagtttggatcaaatc
cgccaagtggttgagctgctagagcacccagagcgcgacaaccttgttgctgtcgtttca
atgcaagagattgtggtgctcaaaccctgccgaacaccagaacattggaccagcgaatac
gaaagcctgcgaattgataagctaatggcaaggctgaaaacctatgacattacggggtat
gacattgcgctggggcaactgttcttaaatcccaattcgatacacctttcgtaccaaagc
gccaaacaggtgttgcgtattggccaagtgcgtcagccacaaaaacacaagcacctctat
gaagagttacgtttgccagtattgctttcccctttacgtgagtgttggcaaggcgagcaa
tgggtaagtgtgatgactcagttacaaaccgccgataggtcagggcagttgttgcgtacg
ttagatgcgttatttaaagcaaatggcaatttgaatgaatgtgcacaaagtttgtttatc
catcgtaatacactgcgctatcgattagagaagatcaccgaaatcacggggattgatacc
acatcattgcttggtctggcggaactttatattgcgtatcagctctcaaattttgaataa
DBGET
integrated database retrieval system
