Vibrio mimicus: AL543_00590
Help
Entry
AL543_00590 CDS
T04381
Name
(GenBank) GGDEF domain-containing protein
KO
K20960
diguanylate cyclase [EC:
2.7.7.65
]
Organism
vmi
Vibrio mimicus
Pathway
vmi05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vmi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
AL543_00590
Enzymes [BR:
vmi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
AL543_00590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
PAS_4
PAS_9
Cas10-Cmr2_palm2
PAS
Diguanyl_cycl_sensor
GGDEF_2
GGDEF_GdpP
CBM30
Motif
Other DBs
NCBI-ProteinID:
AMG01571
LinkDB
All DBs
Position
1:134457..135383
Genome browser
AA seq
308 aa
AA seq
DB search
MIELSSIEDIFDHQQFSLHELVLNELGVYVFVKNRRGQYLYANALTLALFETDAQSIIGK
TDHDFFCDDQLSDILSSDQHVFETRSSVTHEERAVAKSNGLDRVYRAVKHPILQKTTGEV
IGLIGVSTDITDIVELREQLYQLANTDALTQLCNRRKLWADFRSAFARAKHSKQPLSCIS
IDIDNFKQINDHFGHDKGDEVLCFLAQLFYELTSEHHICGRVGGEEFIIVLEDTPVATAF
ALAEQIRQRFSQHAFFEQKEHVYLCAGVAIMRLSDHDFTDIYRRSDQALYQTKRSGRNRC
CIYNPSVE
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgattgagctcagtagtattgaagatatttttgatcatcaacagttctctttgcacgaa
ctcgtgttgaacgaactgggggtatacgtttttgtcaaaaaccgccgtggccagtacctc
tacgccaatgcactcaccttagcgctatttgaaacggatgcgcaatccataattggcaaa
accgaccacgactttttctgcgatgatcaattaagcgatattttatcttccgatcaacat
gtttttgaaacacgctcttccgtcactcacgaggagcgcgccgtcgccaaatccaacggt
ttggatcgagtgtatcgcgcggtaaaacaccctattctgcaaaaaacaactggcgaagtt
attgggttgattggcgtatccactgacattaccgatatcgtggaattacgtgagcaactt
tatcaactggcaaataccgatgccttaacccaactgtgtaatcgacgtaaattgtgggcg
gattttcgttctgccttcgctcgcgcgaaacattcaaaacagcccctgagctgtatctcg
attgatattgataacttcaaacagattaatgaccattttggccatgataaaggagacgag
gtgttatgcttcctcgctcaactcttttatgagctgacttcagagcaccatatttgtggc
cgtgtcggtggcgaagagttcatcatcgtgctggaagacacgcctgttgcaaccgcattc
gcactggcagagcaaatccgccaacgtttttctcaacacgccttttttgagcaaaaagag
catgtctacctctgtgccggtgtcgcgataatgcgcctgagtgatcatgactttacggat
atttatcgacgttcagaccaagcgctctaccaaaccaagcgtagtggccgaaatcggtgt
tgtatctacaatccatccgttgagtaa
DBGET
integrated database retrieval system
