KEGG   Vibrio mimicus: AL543_01045
Entry
AL543_01045       CDS       T04381                                 
Symbol
speF
Name
(GenBank) ornithine decarboxylase SpeF
  KO
K01581  ornithine decarboxylase [EC:4.1.1.17]
Organism
vmi  Vibrio mimicus
Pathway
vmi00330  Arginine and proline metabolism
vmi00480  Glutathione metabolism
vmi01100  Metabolic pathways
vmi01110  Biosynthesis of secondary metabolites
vmi04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:vmi00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00330 Arginine and proline metabolism
    AL543_01045 (speF)
  09106 Metabolism of other amino acids
   00480 Glutathione metabolism
    AL543_01045 (speF)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    AL543_01045 (speF)
Enzymes [BR:vmi01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.17  ornithine decarboxylase
     AL543_01045 (speF)
SSDB
Motif
Pfam: OKR_DC_1 OKR_DC_1_C OKR_DC_1_N Beta_elim_lyase GKRP_SIS_2
Other DBs
NCBI-ProteinID: AMG01654
LinkDB
Position
1:complement(233162..235324)
AA seq 720 aa
MNSLKIATSLSVRSCFTTQREVVDVLKTDFCDIGAAVVSVEDVQNGVIDKMNATGLKLPI
FVAVCCEDQFPDDFCADITGVFELCDAKVEFYGKQVETAVRRYQESLLPPFFGTLKKYVD
MGNSTFACPGHQGGQFFRKHPVGRQFFDFFGETLFRSDMCNADVRLGDLLIHEGAPHDAQ
AYAAKVYNADKTYFVLNGTSASNKVVCNALLTPGDLVLFDRNNHKSNHHGALIQAGATPV
YLETARNPFGFIGGIDAHCFNESYLRDAVRNVDPSRAEAKRPFRLAIIQLGTYDGTIYNA
RQVVDRIGHLCDYILFDSAWVGYEQFIPMMKDCSPLLLDLKPEDPGIIVTQSVHKQQAGF
SQTSQIHKKDHHIKGQERYCNHKRFNNAFMLHASTSPFYPLFAALDVNAKMHEGDSGRYL
WREAVKTGIEARKLLMKKCKYIKPFIPPMIEGKPWQSHPTEQIADDLRFFEFEPGQKWHA
FEGYEHGQYFVDPCKFLLTTPGIDPETGEYEHFGIPATILANFLRENNIIPEKCDLNSIL
FLLTPAEDMAKMQHLVAQIARFERLIEEDAPLSEVLPNVYRANRERYKGYTIRQLCQEMH
DLYVSRDVKQLQKEMFRARYFPRAVMNPQEANLAFVRGQVELVPLREVEGRIAAEGALPY
PPGVLCVVPGEIWGGSVQRYFLALEEGINLLPGFAPELQGVYLEPTGEGRVQAMGYVLKR
NT seq 2163 nt   +upstreamnt  +downstreamnt
atgaattcattaaaaattgctacgagtttatcggttcgctcttgcttcacgacccaacgt
gaagtggtggatgtactgaaaaccgacttctgtgacatcggtgcggcggtggtttccgtc
gaagacgtacaaaacggcgtcatagataaaatgaatgcgaccggtttgaaactgccgatc
tttgttgctgtgtgctgcgaagaccaattcccagatgatttttgcgctgatatcaccggg
gtatttgagctgtgtgatgccaaagtcgagttctacggtaagcaagtggaaactgccgta
cgtcgttatcaagaaagcctgttgccacctttctttggtacattgaaaaaatacgtagac
atggggaactccacttttgcttgcccaggccatcaaggtggtcagttcttccgtaagcat
ccggttggtcgccagttctttgatttctttggtgaaaccttgttccgctcggatatgtgt
aacgcggacgtacgtttgggcgacttgctgatccatgaaggcgccccacatgatgcgcag
gcttacgccgcgaaagtgtacaacgcggataaaacctacttcgtactcaacggcacatcg
gcctccaacaaagtggtgtgtaacgcgctgctgacaccgggagatttggtgctgtttgac
cgcaacaaccataaatccaaccaccatggtgcgttaattcaagcgggggcgacaccggtt
tacttagaaacggcgcgtaacccatttggttttatcggcgggattgatgcgcactgcttt
aacgaatcttacctgcgtgatgcagtacgtaatgttgatccaagccgcgcggaggcgaaa
cgtccattccgtcttgccatcattcagctcggtacttacgacggcacgatttacaacgcg
cgtcaggtggtggatcgcattggtcatctgtgtgactacatcctgtttgactcagcatgg
gtgggctatgaacagttcattcccatgatgaaagactgctcaccacttcttctcgatctg
aagcctgaagatccgggcatcatcgtgactcagtccgtgcataaacagcaggcgggtttc
tcacaaacttcgcaaatccacaagaaagatcaccatatcaaaggccaagagcgttactgc
aaccataaacgctttaacaacgcctttatgctgcacgcctcaaccagcccattctacccg
ctgtttgcggcgctcgatgtgaacgccaagatgcacgaaggagacagtggccgctaccta
tggcgtgaagcggtgaaaaccggtatcgaagcccgtaagctgctgatgaaaaaatgcaaa
tacatcaagccgttcattccaccgatgatcgaaggtaaaccttggcagtctcacccaacc
gagcaaattgccgatgatttgcgtttctttgaatttgaaccgggtcagaaatggcatgcg
tttgaaggttacgaacatggtcagtatttcgttgacccttgtaagttcctgctgaccaca
ccggggattgacccagaaaccggcgaatacgagcactttggtattcctgccaccatcctg
gccaacttcctgcgtgagaacaacatcatcccagagaagtgcgatttgaactcgatcctc
ttcttgctcaccccagcagaagatatggcgaagatgcagcatttagtggcgcaaattgcg
cgttttgaacgcttgattgaagaagatgcaccactgagcgaagtgttacctaacgtgtac
cgcgcgaatcgcgaacgctacaaaggctacaccatccgtcagttgtgtcaggaaatgcac
gatctgtatgtcagccgtgatgtgaaacagctgcaaaaagagatgttccgcgcgcgttac
ttcccacgcgcggtgatgaacccacaagaagcaaacttggcctttgttcgtggtcaggtt
gagctagtcccactgcgtgaagtggaaggccgtatcgctgctgaaggcgcactgccttac
cctccaggcgtgttgtgtgtggttccgggagaaatttggggcggttcagtacagcgttat
ttcctcgctctggaagaaggcattaacttgctgccgggctttgcgcctgaattacaaggg
gtctatctggagccgacaggtgagggacgagtacaggcaatgggctatgtactgaaacgt
taa

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