Vibrio mimicus: AL543_01565
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Entry
AL543_01565 CDS
T04381
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
vmi
Vibrio mimicus
Brite
KEGG Orthology (KO) [BR:
vmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vmi03400
]
AL543_01565
Enzymes [BR:
vmi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
AL543_01565
DNA repair and recombination proteins [BR:
vmi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
AL543_01565
Prokaryotic type
AL543_01565
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AMG01750
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All DBs
Position
1:368091..369500
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AA seq
469 aa
AA seq
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MKLVWFRRDLRSFDNTALTAAIESGETVAAVYVATPQQWHQHHLAPIQADFIWRRLAALQ
QELAAINVPLFYQQVADFREAANAVNQLAKALNANQVLANRDYELDEQQRDLRTEQLLAE
QGISWSAFDDKCILPPGSVRTKQGEFFKVFTPFKRAWLSLFQPPVIPRNHSAAPWDVPNE
FSHLVWHTDQLFDYPRVDSSQWSVEFEVIRTQLRDFCRERVQDYHQWRDFPARAGTSVLS
PYLAIGALSARQCVARLYRESEMSALSEGAQVWLSELIWREFYQHLVAIEPNISKSRDFL
EWGARLEWWNDSEKFQRWCEGNTGYPIVDAAMRQLNQTGWMHNRLRMIVASFLTKDLHID
WRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFSPVSQGEKFDPNGDFIRRW
VPELRSVSSAYIHQPWTYPAVNSVLYPAPLVDHKQEREVTLRLYKTAKG
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaaattggtttggtttcggcgcgatctgcgcagctttgataacacggcacttactgct
gcgatagaaagtggagaaacggtggccgcggtgtatgttgcgacacctcagcagtggcat
caacaccatttagctccgatccaagcggattttatctggcgtcgtttggccgcattgcag
caagagttagcagcaatcaatgtcccgcttttttatcagcaagtagcggattttcgtgag
gctgctaatgctgttaatcaactggcaaaggcgttgaatgccaatcaagttttggccaac
cgagattatgagttggatgagcagcagcgtgatcttcgcacagagcagttgctcgctgag
cagggaatttcatggtctgcttttgacgataagtgcattcttcctccgggttcagtacgc
accaaacaaggtgaattttttaaagtgttcacccctttcaaacgcgcttggttaagcttg
ttccaacctccggtgatcccaagaaaccactctgctgccccttgggatgtacctaacgag
ttcagccatttggtctggcacacagaccaattatttgattatccaagagttgatagttct
caatggtctgtggagtttgaggttatacgtactcaactgcgcgatttttgccgagagcga
gtgcaggactaccatcaatggcgtgatttcccagcgcgtgcaggcacaagtgttctttca
ccttatttagcgattggtgctttatcggcacgtcaatgtgtcgctcgcctttatcgagaa
tcagaaatgagcgcactcagcgaaggtgcccaagtctggctaagtgagcttatttggcgg
gagttctatcagcacttggtggcgattgagcctaatatttcaaaaagccgagatttcctc
gaatggggtgctcgccttgaatggtggaacgatagcgaaaaattccagcgctggtgtgaa
ggcaacacggggtatccgattgtcgatgctgcgatgcgtcagctcaatcaaacgggatgg
atgcacaatcgcctacgcatgatagtcgcgagctttctgaccaaagatctacacatcgat
tggcgctggggtgaacgttattttatgagtcgtctgattgatggtgattacgcggctaac
aatggtggttggcagtggtgcgcgtcaacggggtgtgatgggcagccttattttcggatt
tttagtcctgtcagtcagggggaaaagttcgatccaaatggggattttatccgccgttgg
gtacctgaactgcgttccgtttcctctgcctatattcatcagccttggacctatccagcg
gtcaatagtgtgttatatcctgcgccactagttgatcataaacaggaaagagaagtaacc
ttacgtttgtataaaacagcgaagggataa
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