Vibrio mimicus: AL543_01935
Help
Entry
AL543_01935 CDS
T04381
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
vmi
Vibrio mimicus
Pathway
vmi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AL543_01935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vmi03000
]
AL543_01935
03400 DNA repair and recombination proteins [BR:
vmi03400
]
AL543_01935
Enzymes [BR:
vmi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
AL543_01935
Transcription factors [BR:
vmi03000
]
Prokaryotic type
Helix-turn-helix
AraC family
AL543_01935
DNA repair and recombination proteins [BR:
vmi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AL543_01935
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
YdaS_toxin
Motif
Other DBs
NCBI-ProteinID:
AMG01817
LinkDB
All DBs
Position
1:446365..447723
Genome browser
AA seq
452 aa
AA seq
DB search
MISLNEYTAEEYQRARMSRDPRFDGRFFVAVKTTGIFCRPICPANLPKEENVEYFTTQAQ
AVSAGYRPCLRCRPESTPNSWAWKGAETTFLRALKLIEQGELQGNLDDLAARLGISDRYL
RQLFQRHLGLPPKQYAQIQQLMFAKQLLHSSQISITEVAYASGFQSTRRFNDAFQKLFRL
TPTQVRRDRTDFPSRNQLTLAFRGPFDWAHMLDFYRQRAIEGMELVDEQSYQRHFVLGEG
KGWFKASMGESHLQIEFEMERLSDLRHLVARLRRMFDLDADLITIEAQLAHVAPGLVIRS
GIRIPGVWNAWEAGVRAVLGQQVSVKAAIGQLNLLASQLTAAEGLERYFPTPEQVNAHDL
SFLRMPQKRKETLKRLAEFVLLHPMDPPSEWLQLSGIGPWTVDYAQLRGESQSDRFLTGD
LVVKKALAQFPLLTAESVAPWGSYATFHCWSH
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgatatcgctgaatgaatacacagcggaagagtatcagcgtgcgcggatgagccgagat
ccacgttttgatggccgcttttttgtggcggtgaaaacaacagggattttttgtcgtccg
atttgtccggcaaatttacccaaagaagagaatgtggagtatttcaccactcaagctcag
gctgtttcggcgggctatcgcccatgtttgcgttgccgaccggagagcactcccaattca
tgggcttggaaaggggcagaaactacatttttacgtgctttgaagttgattgaacaaggg
gaactgcaaggcaatctggatgatttagccgctcggttaggcatcagtgatcgttatttg
cgtcagttgtttcaacgccatttaggactaccacccaagcagtatgcccagatccagcaa
ttgatgttcgccaagcagcttctgcattcgagccaaatatccattacggaagtggcttat
gccagtggttttcaaagtactcgtcgcttcaatgatgcgtttcaaaagcttttccgtttg
actccaacgcaagtgcgacgtgatcgaacggacttcccctctcgtaatcaactcacgttg
gcttttcgcgggccatttgactgggcgcacatgctggatttctatcgccagagagcaatt
gagggcatggaattggtcgatgaacaaagttatcagcgtcattttgtactcggtgaagga
aagggttggtttaaggcaagtatgggggagtcccacttacagattgagtttgaaatggaa
cgcttaagtgatttgcgccatttggttgctcggttaagacgaatgtttgatctggatgcc
gacctgatcacgattgaggcacagttggcgcatgttgcgccggggttggtgattcgctca
gggatccgcattccaggagtatggaatgcttgggaagcgggcgttcgtgctgtgttaggt
caacaagtttcggtaaaagcggccattgggcaattgaatttgttggcatcgcagcttact
gctgctgaaggtttggaacgctatttcccgactccggagcaggtgaatgcgcacgattta
agttttttacgtatgcctcaaaaacgtaaagagacattaaagcggttggctgagtttgtg
ttgctgcatccgatggatccgccctcggagtggttacagctgagtggcattggtccatgg
actgtcgactacgctcagttacgtggcgaatcgcaaagcgatcgatttttaacgggtgat
ctggtggtcaaaaaagcactggctcagttccctttgctgaccgcggaatctgttgccccg
tggggcagctatgccacttttcattgttggagccattaa
DBGET
integrated database retrieval system
