KEGG   Vibrio mimicus: AL543_02080
Entry
AL543_02080       CDS       T04381                                 
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
vmi  Vibrio mimicus
Brite
KEGG Orthology (KO) [BR:vmi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vmi02044]
    AL543_02080
Secretion system [BR:vmi02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   AL543_02080
SSDB
Motif
Pfam: VipB VipB_2 DMP12
Other DBs
NCBI-ProteinID: AMG01844
LinkDB
Position
1:477338..478816
AA seq 492 aa
MMSNTEKVLERPQLAQGSLLDEIMAQTRIAPSEEGYDIAKKGVAAFIENLMGSSNSAEPV
NKSLVDQMLVELDKKISAQMDEILHHSQFQQMESSWRGLKLFVERTDFRENNKVEILHVT
KDELLEDFEFAPETAQSGLYKHVYSSGYGQFGGEPVGAIIGNYAFTPSTPDMKLLQYMGA
LGAMAHAPFISSVGPEFFGIDSFEELPNVKDLKSTFESPKYTKWRALRESEDARYIGLTA
PRFLLRVPYDPVENPIKSFNYAENVSASHEHYLWGNTAFAFATRLTDSFAKYRWCPNIIG
PQSGGAVEDLPVHVFESMGALQSKIPTEVLITDRKEFELAEEGFIALTMRKGSDNAAFFS
ANSIQMPKIFPNTKEGKEAETNYKLGTQLPYMMIINRLAHYVKVLQREQIGAWKERQDLE
RELNSWIKQYVADQENPPADVRSRRPLRAARIEVMDVEGNPGWYQVSLSVRPHFKYMGAN
FELSLVGRLDQA
NT seq 1479 nt   +upstreamnt  +downstreamnt
atgatgtctaatactgaaaaggtcttggaaagaccacagcttgcccaaggcagtctactt
gatgaaatcatggctcaaactcgaattgcaccaagcgaagagggctatgacatcgcaaag
aaaggtgtcgccgcatttatcgaaaatttgatgggttcctcaaattccgcagagccagtt
aacaagtctttagtggaccagatgctggttgaactagataaaaaaataagtgcccaaatg
gatgagatccttcatcattcgcagttccaacaaatggaatcttcatggcgtggcttaaag
ctgtttgttgagcgtactgacttccgtgagaataacaaagtcgaaatccttcatgtcact
aaagatgagctactggaagatttcgagtttgctccagaaacggcacaatctggactctac
aagcatgtttattcatcgggttatggtcaatttggtggcgaaccagtaggtgccatcatt
ggtaactacgcatttactccttcaacaccagatatgaagctactgcagtacatgggggca
ttgggcgcaatggcacatgctccatttatttctagtgttggaccagagttcttcggtatc
gattcttttgaagagctgccgaatgttaaagatctcaaatctacttttgaaagccctaaa
tatactaaatggcgtgcactgcgtgagtcagaagatgcacgttatatcggtttaactgca
cctcgcttcttgttacgcgtcccttacgatcctgtcgaaaatccaattaagtcatttaat
tatgcggaaaacgtaagcgcatctcatgaacattacttgtgggggaatactgcatttgct
tttgccacacgtctgactgatagctttgctaaatatcgttggtgtccaaacatcatcggt
ccgcaaagtggtggtgcagtcgaggatctaccagtccacgtatttgagtcaatgggcgca
ttacaaagcaaaatcccgacggaagtgctaatcaccgatcgaaaagagtttgaacttgcc
gaagaaggctttattgctctgaccatgcgcaaaggtagcgataatgcggctttcttctcc
gcgaactcaattcaaatgccgaaaattttccctaataccaaagaaggcaaagaagcggaa
accaactacaagttgggtactcaactgccgtacatgatgatcatcaaccgtctggcacat
tacgtgaaagtattgcaacgcgaacagattggtgcgtggaaagagcgtcaagatctcgag
cgtgaattgaactcatggattaaacaatacgttgccgatcaggagaacccgccagcggat
gttcgtagccgtcgtcctttacgtgctgcacgtattgaagttatggatgtcgaaggcaac
ccaggttggtatcaagtatcgctctctgttcgaccacactttaaatacatgggtgcgaac
tttgagttgtccttggttggacgtcttgatcaagcttga

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