KEGG   Vibrio mimicus: AL543_02120
Entry
AL543_02120       CDS       T04381                                 
Symbol
clpV
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
vmi  Vibrio mimicus
Pathway
vmi03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vmi00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AL543_02120 (clpV)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vmi02044]
    AL543_02120 (clpV)
Secretion system [BR:vmi02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   AL543_02120 (clpV)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 AAA_16 ClpB_D2-small AAA_22 AAA_7 TniB Clp_N ATPase_2 AAA_25 nSTAND3 NACHT AAA_14 RsgA_GTPase bpMoxR DUF815 Sigma54_activat ResIII NBD_SMAX1 Ras SRP54 Rad17 AAA_6 AAA_11 SLFN-g3_helicase AAA_33
Other DBs
NCBI-ProteinID: AMG01852
LinkDB
Position
1:486129..488738
AA seq 869 aa
MIRIELPTLIAKLNAQSKLALEQAASLCIERQHPEVTLEHYLDVLLDNPLSDVRLVLKQA
GLELEQVKQAIASTYTREQVLDTYPAFSPLLVELLQEAWLLSTTELEQTELRSGAIFLAA
LTRADRYLSFKLIQLFEGINRENLKKHFAVILGDSAETAVSQGEKKAAGALQEAAETPFG
RFCTNVTEQARNGELDPVLCRENELNLMVDILCRRRKNNPIVVGEAGVGKSAMIEGLALR
VVAGKVPTKLQNVELYALDLGRLQAGASVKGEFEKRLKGVIDAIKQSPKPIILFIDEAHT
LIGSGNQEGGSDAANLLKPALARGELSTVAATTWKEYKKYFEKDPALTRRFQLVKLDEPT
IDQAVDILRGLNGVYEKAHNVLITDDALKAAAELSARYISGRQLPDKAIDVLDTACARIA
INMTTPPKRLALLETLCHQRQLEIDMLERAQFLGQDVDGERLDVLRNQELTDEAEKAELT
ASWQQQKELVESIIALRAELMELSQAEEPDPDHSQVVRTALQEQYEALEAIAHEKRLMHP
QVDAAQIAEVIADWTGVPVDQMNTDELHKITHLTSILGQAIKGQETAIERIHRHLLTARA
DLRRPGRPKGAFLLVGPSGVGKTETVVQLAEQLYGGKQFLTTINMSEYQEKHTVSRLIGS
PPGYVGYGEGGVLTEAIRKMPYSVVLLDEVEKAHPEVLNIFYQGFDKGEIADGEGRVIDC
QNIVFFLTSNLGYQTIVDYADEPAKLDEALYPELAAFFKPALLARMEVIPYLPLGKEVLA
QIVRGKLTRLEKLFKTRYNAEVVIEESLIEEILSRATRSENGARMLEAIIEGQLLPPVSL
ALLNKLAERAPVQHIRLAAEEGEFIGEVS
NT seq 2610 nt   +upstreamnt  +downstreamnt
gtgatccgtattgaattacccactcttattgcaaaactgaatgcacaaagcaaattggcg
ctggaacaagcggcttctctctgtattgagcgccagcaccctgaagtcaccctagaacac
tatctagatgtactgctggataatccattatctgacgtgcgtctggtactcaagcaagca
ggattggagcttgagcaagttaagcaagcaattgcttcgacttacactcgcgaacaggtg
ttagacacttatccagcattttctccattactggttgagttgctgcaagaagcgtggcta
ctgtcgacgactgagcttgagcaaacggaactgcgttcaggagcgattttcttagcggcg
ttgacccgtgcggatcgttacctctcgtttaaactgattcaactttttgaaggcattaat
cgcgaaaacctgaaaaaacacttcgccgttatcctaggcgactctgcggaaaccgctgtt
tcacaaggtgagaaaaaagcggctggtgctttgcaggaagcggctgaaacaccatttgga
cgtttttgcacgaatgtgacagagcaggcgcgtaacggtgaacttgatcctgtgttatgc
cgtgaaaatgaactcaacttgatggtggatattctgtgtcgccgccgtaaaaataacccg
atcgtagtgggtgaagctggggtgggaaaaagtgccatgattgaaggtttggcactgcgt
gtcgtggcaggaaaagtcccaaccaaactgcaaaatgttgagctttacgcgctggatctt
ggccgtttacaggccggagcatccgttaaaggtgaattcgaaaaacgtcttaaaggcgtc
attgatgcaattaaacagtcgcccaaacctatcattctgtttattgatgaagcgcatacc
ctaattggttcaggcaaccaagaaggtggtagtgatgccgctaacttgcttaaaccggct
ttagcgcgcggtgagttgagcacggtcgcagcaaccacttggaaagaatacaaaaagtat
tttgagaaagatccagcactgactcgtcgcttccaactggtcaagcttgatgaaccgact
attgatcaagcagtagatattctacgtggcctcaatggtgtttatgaaaaagcacataac
gtgttaattaccgatgatgcgcttaaagcggctgctgagctgtcagctcgttacatttca
ggtcgtcaattgcctgataaagcgattgatgtgctggataccgcttgcgcgcgtatcgca
atcaatatgacgaccccaccaaagcgcttggcgttgctagaaacactctgtcatcagcgt
cagcttgaaattgatatgctagaacgtgcgcaattcttaggccaagatgtggatggtgag
cgccttgatgtattgcgcaatcaagagttgaccgatgaagcggaaaaagctgagctgacg
gcaagttggcagcaacaaaaagagttggtggagtcaatcattgcactacgtgcggagttg
atggaactgagccaagcggaagaacccgatcccgaccattcgcaggtggttcgtacggca
ctgcaagagcagtatgaagcgctagaagcgattgctcatgaaaaacgtttgatgcatccg
caagtcgatgcggctcagattgcggaagtgatcgctgattggacaggtgtgccggttgat
cagatgaatactgacgaattgcacaagattactcatctaacctcgattttaggacaagca
atcaaagggcaagaaacagcaatcgagcgtattcatcgccatctactaactgcacgcgcg
gatctgcgtcgtccgggacgtccgaaaggagcattcttactggtaggcccaagtggggta
ggtaagacggaaacggtggtgcaattggctgaacagctttatggcggtaagcaatttctc
actactatcaacatgtctgaataccaagagaaacatactgtttcgcgtttaattggttcc
cctcctggttatgttggctacggtgaaggtggcgtactgactgaagccattcgcaaaatg
ccttattccgtggtcttgctcgatgaagtggagaaagcccatccagaagtattgaacatc
ttctatcaaggttttgataagggtgagattgcggatggtgaaggacgcgtcattgattgc
caaaacatcgtcttcttcctgacttcgaatttgggttatcaaaccatcgttgattatgcc
gatgaacccgccaagctcgatgaagccctttaccctgagttagcggctttctttaaacct
gctttgttagcgcgtatggaagtgattccgtatttgccacttggcaaagaagtgctggcg
caaattgtgcgcggcaaactgacgcgtcttgagaagctgttcaagactcgctacaacgct
gaggtggtgattgaagagagcttgattgaagaaattttaagccgtgcaacgcgcagtgaa
aatggtgcgcgtatgctagaagccatcattgaaggccaattactcccacccgtttccttg
gcgctgctcaataaactcgccgagagagcacccgtacagcacattcgtttggctgccgaa
gagggtgagtttattggggaggtgtcgtag

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