Vibrio mimicus: AL543_02125
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Entry
AL543_02125 CDS
T04381
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K11908
sigma-54 dependent transcriptional regulator
Organism
vmi
Vibrio mimicus
Brite
KEGG Orthology (KO) [BR:
vmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vmi03000
]
AL543_02125
Transcription factors [BR:
vmi03000
]
Prokaryotic type
Helix-turn-helix
Other families
AL543_02125
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Paralog
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GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA_2
AAA_16
AAA
HTH_50
Motif
Other DBs
NCBI-ProteinID:
AMG01853
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Position
1:488741..490327
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AA seq
528 aa
AA seq
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MSQWLAFATELVGVRKSHQLALQFVDLLTQGLDLSDSLLLLPSSDGRLLVPHDPQRQYAW
SVTDFDVPFAHVLQSSNAMHLTAEELVFWQSNRTFGQFTAKVGMFDSVWIQPLPMGNRQV
HSILLLMGESHGIVNAFADADFLKFVEVFSQQWSLLNDMQREEQNRLELKQSLTDIQRDS
AQRLLANDLSRTLIGESAAMQKLREQIVSAANSQLSVMVQGETGTGKELVAAAVHELSAR
KSAPFVAINCAAIPEHLLESELFGYCKGAFSGADADKQGLIAQANGGTLFLDEIGDMPLT
LQAKLLRVLESRTFRPLGGKQELSSDFRLVSATHVNLLDHVRKKVFRQDLYYRLFQYPIT
LPRLASRLDDIELLGEHFVRVFNLQHNTRIRGLNYRAIDCLKQYDFPGNVRELKHLIEFG
CAQTADGTEVEANCFAHRLQSMECLNGSGQVSASLPSEESKDPASIMSSEPNFAVINDLK
QALNEFEAQIISERLTRFSGDRAKAAKSLGIPKRTLAYKCLKLEIKTP
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaatggttagcgtttgcgaccgaattggtgggagtgagaaaatcccaccagctt
gcgctgcaatttgtggatctgctgactcaaggtttggatctgagtgacagccttttgttg
ttgccatcatccgatgggcgtttacttgtacctcatgatccgcagcgacaatacgcttgg
tctgtgaccgattttgatgtgccgtttgctcacgttttacagtcgtcgaatgcgatgcat
ctgaccgcagaagaactggttttctggcaatcaaaccgcacttttggccaatttacagcc
aaagttggcatgtttgactcggtgtggatccaacctttgccgatgggtaatcgtcaggtg
cactccattttgttgctgatgggagaaagccacggcatcgtcaacgcttttgcagatgcg
gattttcttaagtttgttgaagtgttttcacagcagtggtcgttgcttaatgatatgcag
cgtgaagagcaaaaccgccttgagctaaaacagtcgctcaccgatattcagcgagattca
gcgcagcgcttactggcaaatgatttatctcgcaccctgattggtgaaagtgctgctatg
caaaaactgcgtgagcagattgtttccgcggccaattcacaactatcggtaatggtgcaa
ggggaaactggcacagggaaagaattagttgctgcggcggtacatgagttgtctgcgcgt
aaatccgccccatttgtggcgatcaactgtgcggcaattcctgaacatttgctagaaagt
gaactgtttggttactgcaaaggcgctttttcaggtgctgatgcagataaacagggtttg
atagcccaagccaatggcggcactttgttcttggatgaaatcggtgatatgccgcttact
ttgcaagctaaattgctgcgagtattggaatcacgcaccttccgtccactgggcggtaag
caagaactcagttccgattttcgactggtttcagcgactcacgtcaatctgctcgatcac
gttcgtaaaaaagtgttccgccaagatctctattatcgcttgtttcaatatccgattact
ttgccacgtctagcgtcgcggttagacgatattgaattgctgggtgagcattttgtgcgt
gtgtttaatttgcagcacaacactcgtattcgtggtttgaactaccgagcgattgattgt
ctcaagcaatatgactttcctggcaatgtccgtgaattaaagcacttaattgaatttggc
tgcgcgcaaaccgcggatggtactgaagtcgaagcgaattgctttgcccatagactgcag
tcaatggaatgcctgaatggatctgggcaagtaagcgcatctttgcctagcgaagaaagc
aaagatccagcctccattatgagcagtgaacccaatttcgcagtgattaatgacttaaag
caggcactgaatgagtttgaagcgcagatcatcagtgagcgtctcactcgtttttctggt
gatcgcgcgaaagcggcgaaaagccttggcattcctaagcggactttggcttacaagtgt
ctgaaattggagatcaaaaccccatga
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