Vibrio mimicus: AL543_03030
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Entry
AL543_03030 CDS
T04381
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
vmi
Vibrio mimicus
Brite
KEGG Orthology (KO) [BR:
vmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vmi03400
]
AL543_03030
Enzymes [BR:
vmi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
AL543_03030
DNA repair and recombination proteins [BR:
vmi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
AL543_03030
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
DUF3759
Motif
Other DBs
NCBI-ProteinID:
AMG02015
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Position
1:686146..687696
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AA seq
516 aa
AA seq
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MHYPVVRLILGDQFNHAHSWFAEPRDDVLYLIAELHQEQAYVRHHIQKQCAFFAAMKAFA
DYLSAEGHHVMHLDLDATAEFADLPHLIGQVCSQVQARSFQYQRPDEYRLLEQLANLRLP
EAIIGCVDTEHFLLPFSEITEQFPAGKTVLMEHFYRRMRKRFSYLMEPDGKPEGGQWNFD
ADNRNKLKAQDLLNLPAPLRFDNPISSIKARLERHGIESMGRVGDSLLWPINRGQALSLL
AHFCQHCLTNFGRFQDAMTAEHPHSWSLYHSRLSFALNCKLLSPREVIETAIETYRLAQG
EISLAQIEGFVRQILGWREYVRGMYWSNMPSYKTRNHLQALRPLPGYFWHGQTHMRCLQQ
AITQSLDFGYAHHIQRLMVTGNFALLTECNPDQVDAWYLGIYIDAIEWVELPNTRGMALF
ADGGLIATKPYAASGSYINKMSDYCTSCSYQVKQKSGEHACPLNSLYWRFMLKHRDRLAN
NPRIGMLYKTWDKMKSSDQQAILVAAEAYINQLETL
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgcactatccggttgttcgattgatattgggggatcaattcaatcatgctcactcttgg
tttgccgaacccagagatgatgtgttgtatctgatcgcggagttgcatcaggagcaggcg
tatgtgcgtcaccatatccaaaagcagtgcgcgttttttgctgccatgaaagcatttgcc
gactatctatcggcagaggggcatcacgtcatgcatctggatctggatgccaccgcagag
tttgccgatttgccgcatctgatcggtcaggtatgttcccaagttcaagccagatccttt
cagtatcaaagaccagacgaatatcgcttactcgaacagttagcgaatttacgtttgcct
gaagcgatcattggttgtgtggatactgagcactttctgttgccattttctgaaatcacc
gagcagtttcctgccggaaaaacggttttgatggaacacttttatcggaggatgcgtaaa
cgtttcagctatttgatggaaccggatggtaaaccagagggtggacaatggaattttgat
gcggataaccgcaataaattaaaagcgcaggatctgcttaacttgccagccccgttgcgg
tttgataacccaatctcgtcgatcaaagcacgtttagagcggcatgggatcgaatcaatg
ggtcgggtgggggattctttgctatggccgattaatcgtgggcaagcgctctccttactg
gcgcatttttgccagcactgcttaaccaactttggccgctttcaagatgcgatgacggcg
gagcacccgcacagctggagcctctatcacagtcggctttcatttgcgctgaattgtaag
ctgctttccccacgcgaagtcattgaaacggctattgaaacttatcgtcttgctcaaggg
gagatctctttagctcaaatagaaggttttgtgcggcaaattttgggctggcgggagtat
gtgcgcggcatgtattggagcaatatgcccagctacaaaacacgtaatcatttacaagct
ttgcgcccgttgccgggctatttttggcatgggcaaactcacatgcgttgtctacaacaa
gcgatcacacaatcactggactttggctatgcacaccatattcagcgcttaatggtaaca
ggaaattttgcgcttctgactgagtgcaatccggatcaagtcgatgcatggtacttaggg
atttatatcgatgcgattgaatgggttgagcttcctaatactcgtggcatggcgttattt
gcggatggcggtttgattgccactaaaccttatgccgcgagtggctcttacatcaataaa
atgagtgattactgcacttcgtgttcctatcaggttaaacagaaatcaggtgagcatgcc
tgcccactgaattcgctctattggcgctttatgctcaaacatcgtgaccgactcgctaac
aatcctcgaattgggatgctatataaaacatgggataagatgaaaagtagcgatcaacag
gcgattttagtagccgctgaagcatacattaaccagcttgaaactttgtaa
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