Vibrio mimicus: AL543_05730
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Entry
AL543_05730 CDS
T04381
Name
(GenBank) peptide ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
vmi
Vibrio mimicus
Pathway
vmi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vmi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AL543_05730
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vmi02000
]
AL543_05730
Transporters [BR:
vmi02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
AL543_05730
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AMG02504
UniProt:
A0A1D8SI85
LinkDB
All DBs
Position
1:complement(1254570..1256489)
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AA seq
639 aa
AA seq
DB search
MKQHNLTPIFGKIALSVAAALSFSTWAATYNEAPQLAELVKAGKLPAVEQRLPENPLVVE
PNESIGQYGGTLNLVGKVVDNGHRIRTVAYDNLFNFDATYSKVIPNLATGFTSNAENTEY
VITLRKGVKWSDGSPFTAEDIAFYINDIVGDPEHSGNRPLALPTHDAARAEVIDTYTVKI
TLSKPNGLFIRSLATVDSESYTAFPKQYCSQFLPKFNDKAVANAKAAGFDSWRQYAATKC
EAHYFIEHYTNVDRPVLTAWKVATPPGPNASYAVFERNPYYWQVDTEGNQLPYLDSVRWR
YSEDQEEMVLRAANGEADYQHRHIGQTSYRPLLIENEKKGGYTYEFRPSTLSTELAIALN
QTTKDPLKRELFQNKDFRIALSHAIDREEISETVFSGSVGPYQVAPLKISPFYDEQMATQ
YTEFDPEKANQLLDSLGLNKRDKEGYRLLKNGQRLRIEALSKVADKGVLADSLELVKNQW
KAVGVFLDIRVLEINHVTNLRLTNDFDMIPIIGDGGVGIIDDARHYMPFSPESTWGLGYY
LWVSEPTNEFAVEPPAHVKRQLELWQKLTQTSSQDEQNGYMKEIIQIAKDNFYVIGTVES
MPAGVVVNNKLHNVPENMPQSYNFPTPGPMRMSQLWKSK
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaacataaccttacccctatattcggcaaaatcgcactatcggttgcggcggcg
ctgtctttttcaacttgggctgccacttataatgaagccccacaattagcggagttagtc
aaagcgggcaaattgccagcggttgaacagcgtttgccagaaaatccattagtggtggaa
ccgaatgaatcgattggccaatacggcggtactttaaacctagtgggtaaagtagtcgat
aacggacatcgcatccgcacggtggcttacgataacctgtttaactttgatgctacctat
tcaaaagtcatcccaaacttagcgaccggttttacttctaacgcagagaacacagaatat
gtgatcactttgcgcaaaggcgtgaaatggtctgatggttctccgtttaccgcagaagac
atcgctttttatatcaatgatattgtgggcgatccagaacactcaggtaaccgaccgctt
gctctaccaacgcatgatgccgctcgcgcagaagtgatcgatacgtacaccgtcaaaatt
acgctgagcaaacccaatggtctgttcatccgtagccttgcgactgtagatagtgaaagc
tataccgccttccctaagcagtactgctcacaattcttacctaagttcaacgataaagcg
gtggctaatgcgaaagcggctggctttgactcatggcgtcaatatgcggcgaccaagtgt
gaagcgcactactttattgagcattacaccaacgttgatcgcccagtgttaaccgcatgg
aaagtggctacgcctccggggccaaatgcaagctatgcagtgttcgagcgtaacccttac
tactggcaagtggataccgaaggtaaccaactgccttacctagattcagttcgctggcgc
tacagtgaagatcaagaagagatggtgttacgtgccgccaatggcgaagcggattatcaa
catcgtcacattggtcaaacgtcatatcgtccacttctgatcgaaaatgagaagaaagga
ggctacacctacgagttccgtccaagcacgcttagcactgaactggcgattgcgctgaac
caaaccacgaaagatccactcaagcgtgagttgttccaaaacaaagatttccgcattgcg
ttatctcacgcgattgatcgtgaagagatcagtgaaaccgtcttctctggttcggtcggg
ccttatcaggttgcgccactgaaaatctcacctttctatgatgagcaaatggcgacgcaa
tacacggaatttgaccctgaaaaagcgaaccaacttcttgattcactcggtttgaacaaa
cgtgataaagaaggctaccgcttgctcaaaaacggccaacgtctgcgcattgaagcgctc
tcaaaagtagcggataaaggcgtactagccgattcacttgagctggtgaaaaaccagtgg
aaagctgttggtgtgttcttagacattcgtgtacttgaaatcaaccatgtgaccaacctt
cgtttgactaacgacttcgacatgatcccaattatcggtgatggcggtgttggtatcatt
gacgatgctcgtcactacatgccctttagcccagaatcaacctggggcttgggttactac
ctgtgggttagtgagccaaccaatgagtttgcggttgagccgccagcgcatgtcaaacgc
cagcttgagttgtggcaaaaactgacacaaacctcatcacaggatgagcaaaatggatac
atgaaagagatcatccaaattgctaaagataacttctatgtgattggtactgtggaatcc
atgcctgctggtgttgtagtgaataacaagctgcacaacgtgccagaaaacatgcctcag
tcatacaacttcccaaccccggggccaatgcgtatgagccaactgtggaaatcgaagtaa
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