Vibrio mimicus: AL543_06525
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Entry
AL543_06525 CDS
T04381
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
vmi
Vibrio mimicus
Brite
KEGG Orthology (KO) [BR:
vmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vmi03400
]
AL543_06525
DNA repair and recombination proteins [BR:
vmi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AL543_06525
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
Rad51
GvpD_P-loop
SLFN-g3_helicase
ABC_tran
AAA
AAA_22
AAA_16
RecA
AAA_14
AAA_29
NTPase_1
Zn_ribbon_Thio2
AAA_24
AAA_5
Viral_helicase1
DUF7125
Zeta_toxin
nSTAND3
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AMG05213
LinkDB
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Position
2:complement(99735..101111)
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AA seq
458 aa
AA seq
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MVKAKRAYVCNECGADFPRWQGQCNACGSWNSISEVRLAASPQVARNERLAGYAGALEAK
VQTLADIDLQEVPRFTSGFKELDRVLGGGIVPGAAILIGGNPGAGKSTLLLQTMCLLSAQ
MPTLYVTGEESLQQVAMRASRLGLPKQHLKMLSETNVDRICQIAEQEKPRIMVIDSIQVM
HVADVQSSPGSVAQVRESATALTRYAKQNNVAVFIVGHVTKDGTLAGPKVLEHIIDCSIL
LDGDTDSRFRTLRSHKNRFGAVNELGVFAMTGQGMREVSNPSAIFLSRGEEATSGSSVMV
VWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDVFVNV
VGGVKVTETSADLALLMALLSSFRDRPLPKDVVIFGEVGLAGEIRPVPSGQERLNEAFKH
GFKKAIVPMANMPKGGIEGMQIHGVKKLSDAIAAFDEL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
attgtgaaagcaaaacgcgcctatgtatgtaacgaatgtggagcggattttccgcgctgg
caagggcagtgtaacgcctgtggttcgtggaattcgatttctgaagttcggctagcggcc
tcaccgcaagtggcgcgtaatgaacgactggcggggtacgcgggagctcttgaagcgaaa
gtgcaaactttggcagatattgatttacaagaagtgcctcgattcaccagtggctttaaa
gaactcgatcgcgttctgggtggcggtattgtgccgggtgcggcgattttgattggtggt
aatccgggcgcaggtaagtccaccttgctactgcaaaccatgtgcttactttcagcgcaa
atgccgacactgtacgtcacgggtgaagaatcgctacaacaggtcgcgatgcgtgcttca
cgcctcgggctgccgaaacagcatctgaaaatgctctcggaaaccaatgtggatcgcatt
tgccaaatcgccgagcaagagaaaccacggatcatggtgattgactcgattcaggtcatg
catgtggctgatgtgcaatcttcgcctggtagcgtggcgcaggtgcgtgaatctgcaaca
gcactcacgcgttatgccaaacaaaataatgtcgcggtattcatcgttggccatgttacc
aaagatggtacattggcagggccgaaagtgcttgaacacatcattgactgttcgattttg
cttgatggtgatacggacagccgcttccggactctgcgtagccataaaaaccgttttggc
gcggtgaatgaactcggcgtgtttgctatgacagggcaaggcatgcgcgaagtgagtaac
ccctctgcgattttcctttctcggggtgaagaggcgacatcgggtagctcggtcatggtt
gtgtgggaagggactcgtccactgttggtggaaattcaagctttggttgactattcacaa
ctcgctaacccacgacgagttgctgttggcttagaacaaaatcgcctctctttacttctt
gcggtattgcacaaacacggtggtttgcaaatggccgatcaggatgtgttcgtgaacgta
gtcggtggcgtgaaagtgacggaaacaagtgctgatttggctttgctgatggcgctgtta
tcgagctttcgtgatcgtccgctgccaaaagatgtagtgatttttggtgaagtgggattg
gctggtgaaatccgtccggttccaagtggccaagagcgcctcaatgaagctttcaaacac
ggctttaaaaaagcgattgtacctatggccaatatgccgaagggcggtattgagggcatg
cagattcatggtgtgaaaaaactctctgacgcgattgcggcttttgatgagttgtaa
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