KEGG   Vibrio mimicus: AL543_07025
Entry
AL543_07025       CDS       T04381                                 
Name
(GenBank) general secretion pathway protein GspA
  KO
K02450  general secretion pathway protein A
Organism
vmi  Vibrio mimicus
Brite
KEGG Orthology (KO) [BR:vmi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vmi02044]
    AL543_07025
Secretion system [BR:vmi02044]
 Type II secretion system
  General secretion pathway protein
   AL543_07025
SSDB
Motif
Pfam: AAA_22 GspA_C39-like PG_binding_1 AAA_16 AAA TsaE AAA_19 SLFN-g3_helicase AAA_30 AAA_5 TniB nSTAND3 AAA_7 AAA_18 cobW Mg_chelatase NTPase_1 AAA_25 AAA_23 PIF1 Sigma54_activat ABC_tran
Other DBs
NCBI-ProteinID: AMG02813
LinkDB
Position
2:complement(224596..226185)
AA seq 529 aa
MYLNFFGFDELPFSIVPNARYLYLSQRHQEAIVHLQAGLGDGGGFAMLTGEVGTGKTTVA
RAILASLPGKTRAGMILNPTFSDLELLEAICDEFELNYPKKATLKKLTQVLHEFLLAEHA
QGIQVLLMIDEAQHLAPDVLEQLRLLTNLETENHKLLKVLLIGQPELQEKLRMPQLRQLA
QRITGRYHLLPLSEAQSTDYIRFRLEQASGNPELFNRKACQWIAQQTHGIPRLINLVCDA
ALKQAYQAGEQELSFDRIKRASQEVMSFQSSVYQIAPSKPQAHKMSYLSSALGGIALAVV
LAWQLPPQLDRAVQAYFPAQEIVPPTEHTVFPQPLRSALLNATSSEDAVETLYAVWGYQA
SVMERFCQTQADAVLWCEQQTGDWSTLQAFDLPAVLTLVIDDIRTYAVLFRLNADEAELL
VGDQRYRIARQWLEPLWRGQYSLLWQGGFSRTLKQGMQGADVALLESKLSQVLGEPERPR
DQFDKDLSRKVELFQRWQNMQVDGIAGRQTLRRLELLTQQQAPSLKEEG
NT seq 1590 nt   +upstreamnt  +downstreamnt
atgtatctgaacttctttgggtttgacgaattaccgttttctatcgtccccaatgcgcgc
tatctctacctgagtcagcgtcatcaggaagccatagtacacctgcaagccggattgggc
gatggtgggggttttgccatgctcacgggggaagttgggactgggaaaacgaccgtggcg
cgagccattttggcgagtttgccgggcaaaacgcgtgcagggatgatcctcaatccgact
ttctcggatctagaacttttggaagccatttgtgatgagtttgagctgaactatccgaaa
aaggcgactttgaagaagctgacccaagtactgcatgagtttttgttggcggaacacgcg
caaggcatacaagtgctgctgatgattgatgaagcgcagcatttggctcccgatgtgtta
gagcagctgcgcctgttgactaatctggaaaccgaaaatcataagttgctcaaagtgctg
ctgattggccaaccggaattgcaagagaagctgcgtatgccgcagttgcgtcaactcgcg
cagcgcattacaggacgctaccatttactgccgctgagtgaagcgcaaagcaccgactac
atccgatttcggcttgaacaagccagtggtaaccctgagctgtttaatcgcaaagcctgt
cagtggattgcccagcaaactcacggtattccgcgcttaatcaatctggtgtgtgatgcg
gccttaaaacaggcttatcaagcgggcgagcaggaactgagttttgacagaatcaaacga
gccagccaagaggtgatgagcttccagtcttccgtctatcagattgctcccagtaagcca
caagcacacaagatgtcatatctctccagtgcgctgggggggattgctctcgcggttgta
ttggcatggcaattacctcctcaacttgatcgagcggtacaagcctatttcccagcgcaa
gagattgtgccgcctaccgagcatacggtttttccacaaccgctgcgcagcgcgttactc
aatgctaccagtagcgaagatgccgttgaaactctgtacgccgtttggggttatcaagcc
tccgtgatggagagattttgccaaactcaggcggatgctgtgctttggtgtgagcagcaa
accggagattggtcgaccttacaagcatttgatttacctgccgtgctcactttagtgatt
gatgatattcgcacttatgctgtgttgtttcgtttaaatgcggatgaagctgagctttta
gttggtgatcagcgctatcgcattgcacgccaatggcttgagcctttatggcgtggtcaa
tattctttgctttggcaaggtggcttttctcgtactttgaaacaggggatgcagggagct
gatgtggctttactggagagtaaactctcacaagtcttgggtgagcctgaacgcccacgt
gatcagtttgataaggatttatcgcgtaaggttgagttatttcagcgctggcagaatatg
caggtggatggcattgcgggtcggcaaactttgcgtcgcctagagctgttgacccagcaa
caagcgccgagtttgaaggaggaaggctaa

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