Vibrio mimicus: AL543_07235
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Entry
AL543_07235 CDS
T04381
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
vmi
Vibrio mimicus
Pathway
vmi00061
Fatty acid biosynthesis
vmi00071
Fatty acid degradation
vmi01100
Metabolic pathways
vmi01212
Fatty acid metabolism
vmi02024
Quorum sensing
vmi04146
Peroxisome
Module
vmi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
vmi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
AL543_07235
00071 Fatty acid degradation
AL543_07235
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
AL543_07235
09145 Cellular community - prokaryotes
02024 Quorum sensing
AL543_07235
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vmi01004
]
AL543_07235
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vmi04147
]
AL543_07235
Enzymes [BR:
vmi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
AL543_07235
Lipid biosynthesis proteins [BR:
vmi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
AL543_07235
Exosome [BR:
vmi04147
]
Exosomal proteins
Exosomal proteins of breast milk
AL543_07235
Exosomal proteins of breast cancer cells
AL543_07235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AMG02852
LinkDB
All DBs
Position
2:complement(269143..270948)
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AA seq
601 aa
AA seq
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MTNLDFHIVKRIRQRIAQGGDRAALKHKENGAWQAISWHQFGEQLDALSMALLAQGIGVQ
DKIAIFSNNMPRWTIADFAALQIRAVTVPIYPTNTPEQAAYILQNADAKVVFVGEQPQFD
AALSQFEHCPELRLIVAMKPNIDLKQASCAMHWDDFVAQNQTQDHTPLLELIEQADFDDL
FTLIYTSGTTGTPKGVMLDYRNIAAQLEGHDQRLNLTQDDVSLCFLPLSHVFERAWTAYV
LYKGATNCYLHDVSHVRDALGEVRPTVMCAVPRFYEKIFSAIHEKVAKAPFIRKVLFTWA
VNMGAKMAVCRQQQRQPSWLLTQSHQLADKLVLSKLRALLGGRINFMPCGGAKLDETIGR
FFHAIGINVKLGYGMTETTATISCWDDHCFNPDSIGLSMPGAQVKIGENNEILVRGPMVM
RGYYKLEKETAESFDEHGFLKTGDAGHIDENGNLFITDRIKELMKTSGGKYIAPQVIEGA
IGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQVLEMFEK
RVNELQKELAKFEQVKKFKLLPKAFSMDSGELTPTQKLRRKVINDRYQDEIEEMYQDSSK
K
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacttagattttcacatcgttaaacggatccgtcagcgcattgcccaaggtggt
gatcgagcagcgttgaagcataaagaaaatggcgcatggcaagcaatcagttggcatcaa
tttggtgagcaattggatgctctctcaatggcgcttttagcccaaggcattggtgtgcag
gacaaaattgcgattttctccaacaacatgccgcgttggactattgcggatttcgccgca
ttacagatccgtgctgtgaccgttcccatctatcctaccaatacgccagaacaggcggct
tacatcttgcaaaatgccgatgcgaaagtagtgttcgtgggtgagcagccgcaatttgat
gcagcattgagtcagtttgaacattgccctgaactgcgtttgattgtggcgatgaagcct
aacatcgatctcaaacaagcaagctgtgcaatgcattgggatgattttgtcgcgcagaat
caaacacaagatcatacgccgcttcttgaattgattgaacaagctgactttgacgatctc
tttaccctgatttatacctcaggcaccacaggaactccgaaaggcgtgatgttggattat
cgcaacattgctgctcaattagagggacatgatcagcgattgaatttgacgcaagatgac
gtctcactctgtttcttaccgttgtcgcatgtcttcgaacgcgcttggacggcttatgtg
ttgtacaaaggcgcgaccaactgctacctgcatgatgtctctcatgtgcgtgacgcgtta
ggtgaagtgcgtccgaccgtgatgtgtgccgtaccacgcttctacgaaaaaatcttctct
gcgattcatgagaaagttgccaaagcaccattcatccgcaaagtcctgtttacttgggcg
gtgaatatgggagcaaaaatggcggtatgtcgccagcaacagcgtcaaccttcatggttg
ctcacacaaagtcatcagttagctgacaaacttgtactgagcaaattgcgtgcgctgctc
ggcgggcggatcaactttatgccttgtggtggtgctaagttggatgaaaccattggccgt
tttttccatgccatcgggattaacgtcaaactgggttatggtatgactgaaactacagca
accatctcatgttgggacgaccactgtttcaatcctgactctattggcctttccatgccg
ggtgcacaagtcaaaatcggcgagaacaatgaaattctagttcgtggtccaatggtgatg
cgtggctattacaagttagagaaagaaaccgccgaaagttttgatgaacacggtttcctg
aaaacaggtgatgcgggtcatattgatgaaaatggcaacctgtttattaccgatcgaatc
aaagagctgatgaaaacctctggtggtaagtacattgccccacaagtcattgaaggggcg
atcggcaaagatcatttcattgaacagatcgcggtcattgccgatacccgcaagtttgta
tcagctttgattgtgccttgctttgattcattggaagagtacgccaaagaattaaatatc
aagtatcacgaccgtttagagcttatcaagcatagccaagtactggaaatgtttgaaaag
cgagttaatgaacttcaaaaagagctggcgaagtttgagcaggtgaagaagttcaaactg
ttaccaaaagcgttttctatggatagcggagagctgactccgacgcaaaaactgcgccgt
aaggtcatcaatgaccgttatcaggatgaaattgaagaaatgtaccaagattcttcgaag
aaatag
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