Vibrio mimicus: AL543_07960
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Entry
AL543_07960 CDS
T04381
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
vmi
Vibrio mimicus
Brite
KEGG Orthology (KO) [BR:
vmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vmi03009
]
AL543_07960
Enzymes [BR:
vmi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
AL543_07960
Ribosome biogenesis [BR:
vmi03009
]
Prokaryotic type
ribosomal protein modification factors
AL543_07960
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GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
YajR_YAM
CLP1_P
TRAM
DUF5005
Motif
Other DBs
NCBI-ProteinID:
AMG02985
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Position
2:398911..400323
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AA seq
470 aa
AA seq
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MTVQTFTPNQTTTLETAKKTIAEQSQSSQTTGNKIGFVSLGCPKNLVDSERILTQLRTEG
YEIVNSYHDSDVVIVNTCGFIDSAVQESLDTIGEALKENGKVIVTGCLGAREDEIRQVHP
NVLGITGPHAYQNVLEHVHQYAPKPAHNPFTSLVPDHGVKLTPKHYAYLKISEGCNHRCT
FCIIPSMRGDLVSRPVGEIIGEAERLKNAGVKELLVISQDTSAYGVDTKHSLGFANGSPV
RHNIKALSEELGKMGIWVRLHYVYPYPHVDEIIPLMAEGKVLPYLDIPFQHASPRVLKMM
KRPGQAERTLERIKKWREICPELVIRSTFIVGFPGETEEDFQILLDWLKEAQLDRVGCFK
YSPVEGAAANEIEEQIPEEVKQDRFERFMLVQQEISAAKLQKRIGSTMQVLIDEVDEEGA
IGRTYADAPEIDGLVYLNGETNLKPGELVNVVIEHADEYDLWGCVLHEAQ
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgacagttcagacttttacgccaaatcaaaccacaactctagagacggcgaaaaaaacc
atcgcagagcaaagccaaagcagccaaaccactggcaacaagattggttttgtttcgtta
ggttgcccgaaaaacttagtggattcagaacgtattctgacccaactgcgtaccgaaggt
tatgagatcgtcaacagctaccacgattctgatgtggtgatcgtcaacacctgtggtttt
atcgacagtgcggtacaagagtctctggataccattggcgaagcgctgaaagaaaacggc
aaagtgattgtgactggctgcctaggtgcacgcgaagatgaaattcgccaagtacacccg
aacgtactcggcatcacaggtccgcacgcttatcaaaacgtgttggagcatgtacaccaa
tacgcgccaaaaccagcacataatccgtttaccagcctagtgccggatcacggtgtaaaa
ctgacaccaaagcattacgcctacctgaaaatttctgaaggctgcaaccatcgttgtact
ttctgcatcattccatcgatgcgtggtgacttagtcagccgcccagtgggtgaaattatt
ggtgaagcggaacgcctgaaaaacgcgggcgtgaaagagctgctcgtgatcagccaagac
accagtgcttacggtgtggataccaaacacagcttaggtttcgccaacggttctcctgta
cgccataacatcaaggcactgagcgaagaactgggtaaaatgggcatttgggttcgttta
cactacgtttacccttacccacatgtggatgaaatcatcccattgatggctgaaggaaaa
gtgttgccttatttggatattccgttccaacacgccagcccacgtgttcttaaaatgatg
aagcgtcctggccaagccgagcgcactttagaacgcatcaaaaaatggcgtgagatctgc
ccagaactcgtgatccgctcaacctttatcgttggcttcccgggcgaaactgaagaagat
ttccaaatcctgcttgattggctgaaagaagcacaactcgatcgcgttggctgctttaag
tattcgccagttgaaggcgctgcggcgaatgagattgaagagcagatcccagaagaagtg
aaacaagatcgtttcgaacgctttatgctggtgcagcaagagatcagtgccgccaaactg
caaaaacgcatcggcagcaccatgcaagtgctgattgatgaagtcgatgaagaaggcgcg
atcggccgtacctacgcggatgcaccagagatcgatggtttagtttacctcaacggtgaa
accaacctgaaaccgggtgaattggtaaacgttgtgattgaacacgccgatgaatatgac
ctgtggggctgcgtactgcacgaagcgcagtaa
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