Vibrio mimicus: AL543_09430
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Entry
AL543_09430 CDS
T04381
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
vmi
Vibrio mimicus
Pathway
vmi00071
Fatty acid degradation
vmi00280
Valine, leucine and isoleucine degradation
vmi00310
Lysine degradation
vmi00362
Benzoate degradation
vmi00380
Tryptophan metabolism
vmi00410
beta-Alanine metabolism
vmi00640
Propanoate metabolism
vmi00650
Butanoate metabolism
vmi00907
Pinene, camphor and geraniol degradation
vmi00930
Caprolactam degradation
vmi01100
Metabolic pathways
vmi01110
Biosynthesis of secondary metabolites
vmi01120
Microbial metabolism in diverse environments
vmi01200
Carbon metabolism
vmi01212
Fatty acid metabolism
Module
vmi_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vmi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
AL543_09430 (fadB)
00650 Butanoate metabolism
AL543_09430 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
AL543_09430 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
AL543_09430 (fadB)
00310 Lysine degradation
AL543_09430 (fadB)
00380 Tryptophan metabolism
AL543_09430 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
AL543_09430 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
AL543_09430 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
AL543_09430 (fadB)
00930 Caprolactam degradation
AL543_09430 (fadB)
Enzymes [BR:
vmi01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
AL543_09430 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
AL543_09430 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
AL543_09430 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
AL543_09430 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DUF5546
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AMG03240
LinkDB
All DBs
Position
2:706910..709081
Genome browser
AA seq
723 aa
AA seq
DB search
MIYQAKTLQVNQLANGIAELSFCAPASVNKLDLHTLESLDKALDALAADSSVKGLILSSD
KDAFIVGADITEFLGLFAKPEAELDEWLQFANRIFNKLEDLPFPTLSALKGHTLGGGCEC
VLATDFRIGDATTSIGLPETKLGIMPGFGGTVRLPRLIGADSAMEIITQGKACRAEEALK
VGLLDAIVDSDKLIDSAITTLTQAIEEKLDWQKRRQQKTSALTLSKLEAMMSFTMAKGVV
AQVAGKHYPAPMTAVVAIEEAARLSRDAALDIERKHFIKLAKSTEAQALVGIFLNDQYIK
GLAKQSAKAASQDTQHAAVLGAGIMGGGIAYQSALKGVPVLMKDIAPHSLELGMTEAAKL
LNKQLERGKIDGFKMAGILASITPSLHYAGIDQADVIVEAVVESPKVKAAVLSEVEGLVD
EETILTSNTSTIPINLLAKSLKRPQNFCGMHFFNPVHRMPLVEIIRGEHTSEDTINRVVA
YAAKMGKSPIVVNDCPGFFVNRVLFPYFAGFSLLMRDGANFTEIDKVMERQFGWPMGPAY
LLDVVGIDTAHHAQAVMAEGFPTRMAKSGREAIDALYEAKKFGQKNGSGFYQYTVDKKGK
PKKAFSDDVLAILAPVCGASQSFDPQTIIERTMIPMINEVVLCLEEGIIASAQEADMALV
YGLGFPPFRGGVFRYLDTIGVANYVAMAEKYASLGALYQVPQLLKSMAQQGKSFYSAQQA
SAL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatttaccaagccaaaaccctacaggtaaaccaactcgctaatggaattgccgagctg
tccttttgcgctcccgcttccgttaacaaactcgatctacacacgcttgaatcactcgat
aaagcgttagatgcgctagccgcggattcaagtgtgaaaggcctcattctcagctcagat
aaagacgcttttatcgttggggctgatatcaccgaatttctcgggctatttgccaaaccg
gaagcggaattggatgagtggttacaatttgccaatcgcatttttaacaagctggaagac
ttacccttccccaccttgtcggctttaaaaggccatacgcttggcggtggctgcgaatgt
gtgctcgctaccgattttcgtattggtgatgctaccaccagcattggtttacctgaaacc
aaactgggcatcatgccgggatttggcggaactgtgcgtctacctcgtttgattggtgct
gacagcgcgatggaaatcatcacccaaggtaaagcgtgccgcgcggaagaagcattgaaa
gttggattactggatgcaattgtcgatagcgataagctgatcgattcagcgatcaccact
ttgactcaagccattgaagaaaaactggattggcaaaaacgccgtcagcagaaaacttca
gcactgaccttaagtaaactagaagccatgatgagctttaccatggcgaaaggtgtggtg
gctcaggtggcaggcaaacactatccagcaccgatgaccgcggtagtagcaattgaagaa
gcggcgcgtctatcacgcgatgctgcgctggatatcgagcgcaaacacttcatcaagctc
gcaaaatccaccgaggcgcaagcactggttggtattttcctcaatgatcaatacatcaaa
ggcctagccaaacaatccgcgaaagcggcgagccaagacacccaacacgctgccgtgctc
ggcgcaggcattatgggtggcggcatcgcgtatcaatcagccttaaaaggcgtacctgtg
ctgatgaaagacatcgcaccgcactctttagaactgggcatgaccgaagcggccaagcta
cttaacaaacagttagaacgcggcaagatcgatggtttcaaaatggcgggtattctggct
tccatcactccttccctacattacgcagggattgatcaagcggacgtgattgtcgaagct
gtggtcgaaagtccaaaagtcaaagcggcggtactcagcgaagtggaagggctagttgat
gaagagacgattctgacctccaacacctcgaccattccaattaatctcctcgctaaatca
ctcaagcgcccacagaatttctgtggcatgcacttttttaacccagtgcaccgcatgcct
ttagtggaaatcatccgtggtgaacacacgtcagaagacaccattaaccgagtggtcgct
tatgccgcgaaaatgggcaaatcaccaattgtagtcaatgactgcccaggattttttgtt
aaccgcgtgctgttcccctactttgcaggctttagcttgctgatgcgcgatggcgcaaac
ttcaccgaaattgacaaagtgatggagcgtcaatttggttggccgatgggcccagcgtat
ttgcttgatgtagtcgggattgataccgcacaccacgctcaagcagtgatggcggaaggc
ttcccaactcgtatggccaaatccggccgagaagcgattgatgccctgtacgaagcgaag
aaatttggccagaaaaatggcagcggcttctatcagtatacggttgataaaaaaggtaaa
ccaaaaaaagccttcagcgatgacgtgctagcaattctcgctccggtatgcggcgcatca
caaagctttgatccacaaaccattatcgaacgaaccatgattccaatgattaatgaagta
gtgctctgtcttgaagaagggatcatcgcatctgcgcaagaagcagacatggcgctggtg
tacggtcttggcttccctccgttccgtggtggtgtattccgctatctggatactatcggg
gtcgctaactatgtggctatggcagaaaaatacgccagcctcggcgcactctatcaagta
ccgcaactgctgaagagcatggcgcagcaaggaaaatccttctacagcgctcagcaagcc
agtgccctgtaa
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