Vibrio mimicus: AL543_10770
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Entry
AL543_10770 CDS
T04381
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
vmi
Vibrio mimicus
Pathway
vmi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vmi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AL543_10770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vmi03019
]
AL543_10770
03009 Ribosome biogenesis [BR:
vmi03009
]
AL543_10770
Messenger RNA biogenesis [BR:
vmi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AL543_10770
Ribosome biogenesis [BR:
vmi03009
]
Eukaryotic type
Pre-60S particles
RNases
AL543_10770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AMG03469
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All DBs
Position
2:987558..988103
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AA seq
181 aa
AA seq
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MSFSDQNLIWIDLEMTGLDPETHKIIEMATIVTDSELNILAEGPVIAIHQPESELAKMDE
WCTTTHTASGLVARVRQSQVSEEEAIDQTLAFLKQWVPEGKSPICGNSIGQDRRFLYRHM
PRLEAYFHYRYIDVSTIKELTRRWQPEVLKEFSKTGSHLALDDIRESIAELQFYRKAVFK
I
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttagcgaccagaatctgatttggattgatttagagatgacagggctcgatcct
gaaacgcacaaaatcattgagatggcgaccattgttactgacagtgagttaaatatttta
gccgaaggcccagtgatcgcgattcatcaaccagaatcagaactcgccaaaatggatgag
tggtgtaccacaactcacaccgcgagtggcttggtggcacgagttcgtcaaagccaagta
agcgaagaagaagccattgatcaaacgctcgcttttttaaagcagtgggtaccggaaggc
aaatccccgatttgtggcaacagtattggccaagatagacgtttcctataccgtcatatg
ccgcgtttggaagcttacttccattatcgttatattgatgtcagcaccatcaaagagctg
actcgccgctggcagcctgaagtgctaaaagagttcagtaaaacaggtagccatcttgcg
ttggatgatattcgagagtcgattgctgagcttcagttctatcgtaaggcggtattcaaa
atttaa
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