Vibrio mimicus: AL543_11240
Help
Entry
AL543_11240 CDS
T04381
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
vmi
Vibrio mimicus
Brite
KEGG Orthology (KO) [BR:
vmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vmi03019
]
AL543_11240
03009 Ribosome biogenesis [BR:
vmi03009
]
AL543_11240
Messenger RNA biogenesis [BR:
vmi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AL543_11240
Ribosome biogenesis [BR:
vmi03009
]
Prokaryotic type
rRNA processing factors
AL543_11240
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
AMG03540
LinkDB
All DBs
Position
2:1077016..1078485
Genome browser
AA seq
489 aa
AA seq
DB search
MSAELLLNVTPSETRVAMIEGGILQEIHIEREAKRGIVGNIYKGKVSRVLPGMQAAFVDI
GLDKAAFLHASDIVPHTECVAESEKQQFQVRDISELVRQGQDIVVQVVKDPLGTKGARLT
TDITLPSRYLVFMPGASHVGVSQRIESEEERERLKAVVNHYCDEHGGFIIRTAAEGANEK
ELAQDAAFLKRLWSKVIERRGKYKNRSMLYGELGLAQRILRDFVGTELTKILIDSRQEFE
NLKEFTSEYVPELTTKLELYHGDKPIFDMYDTENEIQRSLERKVELKSGGYLIIDQTEAM
TTIDINTGAFVGRRNLEETIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMASDEHRKRV
LTSLEAALVKDRVKTNINGFTQLGLVEMTRKRTRESIEHVLCSTCPTCEGRGSVKTVESV
CFEILREITRVNRAYDADKFVVYASPAVADTLQGEESHALAELEVFIGKEVRIQAEPLYN
QEQFDVVMM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagagttgctgttaaacgtcacgccgagtgaaactcgggtggcgatgattgaa
gggggaatccttcaggaaatccatattgaacgtgaagccaaacgcggcattgttggcaat
atttacaaaggcaaagtgagccgagttttaccgggcatgcaggctgcgtttgtggatatt
ggactcgacaaggccgcctttttacatgcctctgatattgttccgcacacagaatgcgtt
gcggaaagtgaaaagcaacaattccaagtccgtgatatttctgaattggttcgccaaggc
caggatattgtcgtgcaagtggtcaaagaccctttgggtaccaaaggcgcacgcttaacg
actgatatcactctcccgtcacgttatctggtgttcatgccgggggcgagccacgttggc
gtatcacaacgcatcgaaagtgaagaagaacgtgagcgtttaaaagcggtggtgaatcac
tactgcgatgagcatggcggttttattatccgtactgctgctgaaggcgcgaatgagaaa
gaacttgcccaagatgcggcatttctcaagcgtttatggtcaaaagtgattgaacgccgt
ggtaaatacaaaaaccgctctatgctgtatggcgaattggggttggcacagcgtattttg
cgtgattttgtcggcacggaactcactaagattttgatcgattcccgccaagagtttgag
aacctcaaagagtttacttctgagtacgttcctgagctgaccacgaagttagagctgtac
cacggcgataaaccgattttcgatatgtacgatacggaaaacgagattcagcgctctcta
gaacgtaaagtcgagctgaaatcgggcggatatctgatcatcgatcaaaccgaagccatg
accactatcgacattaacacgggtgcgtttgttggtcgtcgtaacctcgaagagacgatt
ttcaacaccaatatcgaagccactcaagccattgcacgccaactgcgtttgcgtaacctc
ggtggcattatcattatcgattttattgatatggcctcagatgaacaccgtaagcgagta
ctgacttctttagaagcggctttggtgaaagatagggttaaaaccaacatcaatggcttt
actcagctcggtttggtggaaatgacccgcaaaagaactcgagaaagtattgaacatgtg
ctctgttcgacctgtccaacgtgtgaaggacgcggcagtgtgaaaaccgttgaatcggtt
tgttttgagattctacgtgaaatcactcgcgtcaatcgcgcgtatgatgcggacaaattt
gttgtctacgcttctccagctgtggcagatactttgcaaggagaagagtcacacgcattg
gcggagttggaagtgtttattggtaaagaggtgcgtattcaagcggaacctctttataac
caagaacagtttgatgtagtcatgatgtag
DBGET
integrated database retrieval system
