Vibrio mimicus: AL543_12620
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Entry
AL543_12620 CDS
T04381
Name
(GenBank) lytic murein transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
vmi
Vibrio mimicus
Brite
KEGG Orthology (KO) [BR:
vmi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vmi01011
]
AL543_12620
Enzymes [BR:
vmi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
AL543_12620
Peptidoglycan biosynthesis and degradation proteins [BR:
vmi01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
AL543_12620
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Cucumo_coat
Motif
Other DBs
NCBI-ProteinID:
AMG03785
LinkDB
All DBs
Position
2:1367999..1369945
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AA seq
648 aa
AA seq
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MTRLTVFKPHSLVSILMLTTVCAMGSASASALDLEAQRAQYEQAQRWLDEKKIPEYQRIR
KQIESYPLTPYLDYRAFLVDLGSKPPIAVRNFIDSHKEYPFSGRVAAPYLDALAQNKKWA
ALLQFQTQLPNGETYQCYYYNAKLQTGKRSEAFEGAKKLWLNGASIADACDPLFAEWERV
GGLTDEWVLKRSLLAFEGRNRNLMIYLQKKLDGKKSQAKAQAMLELFDKPERVVAYSRKA
SQDPINQKVAELALQKWARSEPQEAQAVLNDVAKAQGWNREQKSRISHFIAIRLMETEDE
ALAKWRDEVTRQSNNVRLIEARTRLALRENNWRELTQWISVLPEQERKTLRWQYWLGRSE
MALGKKKEGTERLKALLGQRSFYSVAAAKVLQQSVNYPTSTVTLDMTLIKAHKKALVRID
ELIALDKVIAAKSEWRWLLERVSQKEKEMLAAYAANAGWHQMTITATISASLWDNNQLRF
PVVHQNLFNLHGQKNGIDPITLMSLARQESAMDSDAQSPVGARGLMQIMPDTARYTARKY
QLSYSNPDELYQVGKNIEIGSRYLSSLLERYDQNRILAFAAYNAGPSRVDTWLKRSQGKL
DAYGFIEAIPFAETRGYVQNILMFETYYRDLMGVEGHFLNDHELNTKY
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgcctgacggtatttaagccgcatagccttgtttcgattttgatgctaaccacg
gtatgtgcaatgggctctgctagcgcgagtgctttggatttagaagcgcagagagctcaa
tatgaacaggctcagcgttggttggatgaaaagaaaattccggaataccaacgcattcgt
aaacagatagagagctatccgctgaccccttatctcgactatcgggcatttttagtcgat
ctcggtagtaagccgccgatcgcggtgcgcaattttattgatagccacaaagagtatcct
ttctctggccgggttgctgcgccttatcttgatgctttggctcaaaataaaaaatgggcg
gcgttactgcaatttcaaacccaattgcccaatggcgagacttatcaatgctattactac
aatgccaagttgcaaacaggaaaacgcagtgaagctttcgaaggcgctaaaaaactgtgg
ctaaatggagcgagtatcgctgatgcctgtgatccattattcgctgagtgggaacgcgtt
gggggattgacggatgagtgggtgttaaaacgaagcttgcttgcgtttgaaggacgcaac
cgaaacctgatgatttatctgcaaaaaaagctggatgggaaaaaatcacaagccaaagcg
caggcaatgcttgaattgtttgataaaccagaacgggtggtagcctatagccgtaaggcc
tcacaagatcccattaatcaaaaggttgcagaattagccttacaaaagtgggcaagatcc
gaacctcaagaggcgcaagcggttctaaacgatgtggccaaagctcaaggctggaatcgt
gagcaaaaaagccggatttcccatttcatcgcaatccgtttgatggaaaccgaagatgaa
gcgcttgctaaatggcgtgatgaggtgactcgtcaaagtaacaacgttcgcttgattgaa
gctcgaactcgtttagcgctgcgtgagaataattggcgagaattgacccaatggatttct
gttttaccagaacaagaacgtaaaacattgcgttggcaatattggcttgggcgcagtgaa
atggcgctcggtaagaagaaagaaggaacagaacgccttaaagctttgcttggtcagcgc
agcttttacagtgttgcggcagcaaaagtgctacaacaatccgttaattatccgaccagc
acagttacgctcgatatgacattgattaaagcacataagaaagctttagtacgaattgat
gagttgatcgctctggataaggttatcgcagcaaaaagtgagtggcgttggctgcttgag
cgagtttcacaaaaagagaaggaaatgttggccgcgtatgctgcaaatgcaggttggcat
cagatgacaatcacggcgaccatttctgcgagcttatgggataacaatcaattacgcttc
ccagtagtacatcaaaacctgtttaatctgcatgggcagaaaaatggaattgatccgatt
accttgatgtcgttggcaagacaagaaagtgcgatggattcagatgcgcaatcaccagtg
ggagctcgaggcttgatgcaaatcatgcctgatacggcgcgctacacggcgagaaaatat
caattgagttattccaacccggatgagttgtatcaagttggcaagaatattgagattggt
agccgttatttaagcagcttacttgaacgctatgatcaaaatcggatcttggcgtttgcg
gcatacaatgctggcccaagtcgagtcgatacttggttgaagcgtagtcaaggcaagcta
gatgcatacggcttcattgaagcgattccttttgctgaaactcgtggttatgtgcagaac
attttgatgttcgaaacctattaccgagatttgatgggcgtggaagggcattttcttaat
gatcacgagttaaatacaaagtattga
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