KEGG   Vibrio mimicus: AL543_12635
Entry
AL543_12635       CDS       T04381                                 
Name
(GenBank) GGDEF-domain containing protein
  KO
K20966  c-di-GMP phosphodiesterase [EC:3.1.4.52]
Organism
vmi  Vibrio mimicus
Pathway
vmi05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vmi00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    AL543_12635
Enzymes [BR:vmi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.52  cyclic-guanylate-specific phosphodiesterase
     AL543_12635
SSDB
Motif
Pfam: EAL GGDEF HAMP
Other DBs
NCBI-ProteinID: AMG03788
LinkDB
Position
2:complement(1370870..1373245)
AA seq 791 aa
MKLNHRILLLIAPVILLSAAASSYIIYSSQKNALLKKTDSYLQLNIEKLASHYRQAQALV
SSYAFTLAKSDIIRHYFSLEKNPYRELELVDNLRETLHILQPSEKQLVSLSILNGNEELL
YYAENSSDPFAEIDPKVMEYVKQRLNSTQSTSDISYTVNSLGEDILVRYDILDTQTLATP
LSYNRQDVFFVVVYVVLEQFSQLRKKIEFDNQSQIFFTHTPPGYRTGLTQSVELQPGFYA
ILAPAPKLINTKLHTIQRELLLSFGVSALVTVLLLLLLLYRHVINPILNLDKQLEEVENN
KRKNIEKLDTNDEIGRLSSRFYAMYTELHSTYQRTKALAENDHLTKLANRYQFQVQADLL
LSRCYDTQHIWVLYIDLDNFKYVNDKYGHQIGDSLLVSFASHVRQLCKSFEASHNAYSIA
ARLSGDEFAILLVAPKRFNDCANLFAQRVLAPIQSQDNSPLSHFPITASIGIATFPKDGD
HIEKLLLNADTAMYQAKNAGKNQIAYYSQALDQVVQRRNNIERALRLGLFDQEFNLVYQP
YFTCSGKRLVGFEVLLRWQSELLGEVSPEEFIPIAEQTGLFGTIDRWVISQTFKEFSALQ
AMFNDPIQVSINLSSAELNSLKLAQYIHQQAEKFSVTPQWIDFEITETFAADSQSFPLLH
ELSRLGYGLTIDDFGSGYTSITQLVQYPVQKIKFDRHFLDTLIATNKQNVIRPLIDLCHS
QAMKVTAEGIESETMHQWLADYHCDYMQGFYFGHPMSLEEIQKWQQSSNHRKKSYAQDHY
CLTEPSQSECS
NT seq 2376 nt   +upstreamnt  +downstreamnt
atgaagctaaaccatagaatcctgttactgatagcgcctgtgattctgctgagtgcagca
gcatcaagctatatcatttacagcagtcagaagaatgcactactgaagaaaacagacagt
tacctacagttaaatatagaaaaattagctagccattatcggcaagctcaagcattagta
agcagttatgccttcactttggcgaaaagcgacatcatccgtcattacttctctttagaa
aaaaatccctatcgtgaattagaactggtcgataatctgcgcgaaacactgcacatccta
caacccagtgaaaaacagctcgtatctctgtcgattctcaatggcaatgaagaactactc
tactacgcagaaaatagctcggatccgtttgctgaaattgaccccaaagtcatggaatat
gtcaaacagcggctgaactctacgcaaagtacctcagacatcagttataccgtaaactcc
ttaggagaagacattctggttcgctatgacatactggatacacaaacactcgcaacacca
ctgagctataaccggcaagatgtgttctttgtagtggtgtatgttgtgttagaacaattc
agtcaactaagaaagaaaattgaatttgataaccaaagccagatcttttttactcatact
ccaccaggctatcgtaccgggctaacccaatcggtcgagttacaacccggattttacgca
attttagcccccgctccgaagctgattaataccaagctgcatacaattcaacgcgaactc
ctgctctcctttggtgtttcagcactggttactgtcttactgcttctgctactgctttat
cgtcatgtgattaaccccattcttaatttggacaaacaactggaagaagtcgaaaacaat
aagcgcaagaatattgaaaaactggatacaaacgatgagattggacgactttcctcgcgt
ttttacgccatgtataccgagctgcactctacctatcaacgcacaaaagcattagcagaa
aacgatcatttaactaaactagccaaccgatatcagtttcaagttcaggccgacctctta
ctttcccgttgttacgatactcaacacatttgggtgttatatatcgatttagataacttc
aagtacgtcaacgataaatatggccaccaaatcggtgactcactcttggtcagcttcgct
tcgcacgttcgtcagttatgtaaaagctttgaagcaagccataacgcatacagtattgcc
gcacgcttatcaggagatgaatttgccattttactggtcgcacctaagcggtttaatgat
tgcgcaaacctatttgctcaacgcgtacttgccccaattcaaagccaagataattcacct
ctaagccatttcccaatcaccgccagtattggtattgccacgtttcctaaagatggcgac
catattgaaaaattactgctgaatgcggataccgccatgtatcaggcaaaaaatgcagga
aaaaaccagatagcttattactcgcaagccctggatcaggtagtgcaacgtcgcaataat
attgaacgagccttgcgcttaggcttatttgatcaagaattcaacttggtttatcagccc
tacttcacctgctcaggtaaacgcttagtcggctttgaagtgttgctacgttggcaatct
gagttacttggtgaggtttctccggaggagtttattccgattgcagaacaaaccgggcta
tttggtaccatagaccgctgggttatttcccagacattcaaagagttttcagccctacaa
gccatgtttaatgacccaatccaggtttctatcaacctttcttcggcagaattgaactct
ctgaagttggctcaatatattcatcagcaagcggagaaattttcggtaacaccacagtgg
attgattttgaaatcaccgaaaccttcgctgcggattcgcaaagcttcccgttgctacac
gagctttctcgtcttggttacggtctaaccattgatgatttcggctccggatacacttca
atcacacagttggttcaatatccggtgcaaaagattaagtttgatcgccatttcttagat
acactcatcgccaccaacaaacagaatgtcatccgtcctctgatcgatctttgccattca
caagccatgaaagtgacagcagaaggcatagaaagtgaaactatgcatcaatggttagcc
gattatcactgcgactatatgcaaggcttttattttggccatccgatgagcctcgaagag
atacaaaaatggcagcagtcatccaaccatagaaagaagagttatgcgcaagatcattat
tgcctcacagaacccagccaaagtgaatgcagttag

DBGET integrated database retrieval system