Vibrio mimicus: AL543_13750
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Entry
AL543_13750 CDS
T04381
Name
(GenBank) glycosyl transferase family 1
KO
K20921
polysaccharide biosynthesis protein VpsD
Organism
vmi
Vibrio mimicus
Pathway
vmi00543
Exopolysaccharide biosynthesis
vmi05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vmi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00543 Exopolysaccharide biosynthesis
AL543_13750
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
AL543_13750
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
vmi01003
]
AL543_13750
Glycosyltransferases [BR:
vmi01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
AL543_13750
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Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
GT4-conflict
Glyco_trans_4_4
WsaF_C
Motif
Other DBs
NCBI-ProteinID:
AMG03976
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Position
2:1601784..1602932
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AA seq
382 aa
AA seq
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MKKVLLIMPLSTLNWGEKNLGGVDSVCQILVRQLTMQERLYNYRILAFDPLNHHTYTGDV
IALSENVEVVMCPLRETRFGLPLPSLLSCWLRIQEQLRAFQPDLVHSHLNSWMLGIGRKT
RNILTLHSYRKIGRKPVSRLNDFLYEKIIPRVSDISVNTYTCVGEELYQALRPETSKPIR
VIGNPVDPEYFAEHSTKLPFANTGIKLVTCALISRAKRIERAIMLLRELKLHHHSATLHI
IGPNVDPTYYEELQQLVKENGLEQDVLFLGKLNQREIAQQFQQADVGVFTSAQETFGLAP
LEMLAVGLPLITTPVGILGERQAEFSKLGVVFMQEGDEGEIAFSINKIKVVDTQAVRSYL
REQFAVENVIEHYQNLYQEVLS
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagtgctacttatcatgccactctctactttgaattggggagaaaaaaatctt
ggcggtgttgattctgtgtgccaaatactggtacgtcagctcacaatgcaagagcgatta
tacaattatcgtattttagcttttgatcccttgaatcatcatacctacactggagacgtc
atcgctttatctgagaatgtagaagtggtgatgtgtccgctgcgtgaaactcgatttgga
ctgcccttaccgagcttattgtcttgttggttacgaatccaagagcagttgagggctttc
caaccggatctggtgcattcccatttgaacagttggatgcttggtattgggcgtaaaact
agaaatatccttacattacactcttatcgtaaaatcgggcgtaagcccgtttcaagattg
aatgattttctctatgagaaaatcattccgcgggtaagcgatatatctgtaaatacatat
acatgtgttggtgaagagttataccaagccttacgacccgaaactagcaagcctattcga
gtgattggcaatcctgtggatcctgaatatttcgctgaacattctacaaaactccccttt
gcaaatactggaattaagttggtgacttgcgctcttatttctcgcgcgaaaaggattgaa
cgagcgattatgctgttgcgagaactgaaactgcatcatcactctgccacattacatatc
attggcccgaatgtggatcctacctattacgaagaattgcagcaattggtgaaagagaat
ggactcgaacaagatgtactctttcttggcaaacttaatcaacgtgagattgcacagcaa
tttcaacaggctgatgttggtgtatttacctcagctcaagaaacttttggtttagcaccg
ttggaaatgttagcggttgggttgccgttaattaccactcctgtggggatcttaggcgag
cgtcaagccgaattttccaagcttggtgtggtttttatgcaagaaggggatgagggggaa
attgctttttctatcaataagataaaggtagtggatacccaggccgttcgatcttatctg
cgcgagcagtttgcagtagaaaatgtgattgaacattatcaaaatctgtaccaagaggtg
ctgagttga
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