Vibrio mimicus: AL543_13850
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Entry
AL543_13850 CDS
T04381
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vmi
Vibrio mimicus
Pathway
vmi00260
Glycine, serine and threonine metabolism
vmi00460
Cyanoamino acid metabolism
vmi00630
Glyoxylate and dicarboxylate metabolism
vmi00670
One carbon pool by folate
vmi00680
Methane metabolism
vmi01100
Metabolic pathways
vmi01110
Biosynthesis of secondary metabolites
vmi01120
Microbial metabolism in diverse environments
vmi01200
Carbon metabolism
vmi01230
Biosynthesis of amino acids
vmi01240
Biosynthesis of cofactors
vmi04981
Folate transport and metabolism
Module
vmi_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vmi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AL543_13850 (glyA)
09102 Energy metabolism
00680 Methane metabolism
AL543_13850 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AL543_13850 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AL543_13850 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AL543_13850 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AL543_13850 (glyA)
Enzymes [BR:
vmi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AL543_13850 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AMG03995
LinkDB
All DBs
Position
2:1625937..1627187
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AA seq
416 aa
AA seq
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MLKRDMNIADYDPELYAAIQEETLRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDKAEALAIDRACQLFGCEYANVQPHSGSQANSAVYMALLNPGDTVLGMS
LAHGGHLTHGSPVNFSGKHYNVIPYGIDEAGQINYDEMEALAFEHKPKMIIGGFSAYSQI
VDWKRMREIADKVGAYLFVDMAHVAGLIAAGVYPSPVPFAHVVTTTTHKTLAGPRGGLIL
SNAGEEMYKKLNSAVFPGGQGGPLMHVIAAKAVAFKEAMEPEFKAYQARVVQNAKAMVAQ
FQERGYKIVSNSTENHLFLVDLIDKNITGKDADAALGAANITVNKNSVPNDPRSPFVTSG
IRVGTPAITRRGFTEQDAKDLANWMCDVLDNINDQGVIEATKQKVLAICKRLPVYA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagcgtgatatgaacatcgctgattatgatccggagctttacgctgccattcag
gaagagacgcttcgtcaagaagaacatattgaacttattgcttcagaaaactacaccagc
ccgcgtgtaatgcaagctcaaggttctcaactaactaacaagtacgccgaaggttaccca
ggcaagcgttactacggtggttgtgagtatgtggataaagcagaagctttggctatcgac
cgtgcttgccaactgtttggctgtgaatacgcgaacgttcaacctcactctggttctcaa
gcgaacagtgcagtgtacatggcgctgctaaacccaggtgataccgttttgggtatgagc
cttgcgcacggcggtcacttgactcacggttcaccagtgaacttctctggtaagcactac
aatgtgattccttacggcatcgatgaagctggccaaatcaactacgacgaaatggaagcg
ttggcctttgagcacaagccaaagatgatcatcggtggtttctctgcctattcacaaatt
gttgattggaaacgcatgcgcgaaatcgcagacaaagtaggtgcttacctatttgtcgat
atggcgcacgttgcaggtttgattgctgcgggtgtttatccaagcccagtgcctttcgca
cacgttgtgactacgaccacgcacaaaactctggctggtccacgtggtggtttgatcctg
tcaaacgctggcgaagagatgtacaagaaactgaactcagcggtgttccctggtggccaa
ggtggtcctttgatgcacgtaattgctgctaaagccgttgcgtttaaagaagcaatggag
cctgagttcaaagcttaccaagcacgtgttgtgcaaaatgcgaaggctatggtggcacag
ttccaagagcgtggttacaagatcgtgtctaacagcactgaaaaccatctcttcttggtt
gatctcattgataaaaatatcacaggtaaagatgcggatgcggcacttggtgcagcaaac
atcacagtgaacaaaaactcagtgcctaatgatccacgtagcccatttgtgacttctggt
attcgtgtgggtactcctgcgatcactcgtcgtggtttcactgagcaagatgcaaaagat
ctcgctaactggatgtgtgatgttctagacaatatcaacgaccaaggtgttatcgaagcg
actaagcaaaaagtattagcgatctgtaaacgtctgcctgtttacgcttaa
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