Vibrio mimicus: AL543_14355
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Entry
AL543_14355 CDS
T04381
Name
(GenBank) fatty acid oxidation complex subunit alpha FadJ
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
vmi
Vibrio mimicus
Pathway
vmi00071
Fatty acid degradation
vmi00280
Valine, leucine and isoleucine degradation
vmi00310
Lysine degradation
vmi00362
Benzoate degradation
vmi00380
Tryptophan metabolism
vmi00410
beta-Alanine metabolism
vmi00640
Propanoate metabolism
vmi00650
Butanoate metabolism
vmi00907
Pinene, camphor and geraniol degradation
vmi00930
Caprolactam degradation
vmi01100
Metabolic pathways
vmi01110
Biosynthesis of secondary metabolites
vmi01120
Microbial metabolism in diverse environments
vmi01200
Carbon metabolism
vmi01212
Fatty acid metabolism
Module
vmi_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vmi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
AL543_14355
00650 Butanoate metabolism
AL543_14355
09103 Lipid metabolism
00071 Fatty acid degradation
AL543_14355
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
AL543_14355
00310 Lysine degradation
AL543_14355
00380 Tryptophan metabolism
AL543_14355
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
AL543_14355
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
AL543_14355
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
AL543_14355
00930 Caprolactam degradation
AL543_14355
Enzymes [BR:
vmi01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
AL543_14355
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
AL543_14355
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
AL543_14355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
LEM
Motif
Other DBs
NCBI-ProteinID:
AMG04090
LinkDB
All DBs
Position
2:1739013..1741139
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AA seq
708 aa
AA seq
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MENKKAFQLSFDEQHYAWLAIDVPGEKMNTLQAAFAEEMQAVFTMLNEKKGQIKGLIIHS
LKPDNFIAGADVRMLEACQSVHEAQALASQGQQMFQQLADLPFPVVAAIHGPCLGGGLEL
ALACDYRVCTEDDVTRLGLPEVMLGLLPGSGGTQRLPRLIGLLPALDLILTGKQLRAKKA
KKLGIVDACVPHSVLLDVAKRVLEEKGHKKRAQTALPIKEKLMANTGLGRKLIFDQAAKK
TQQKTRGNYPAAQAILEVIQYGLEKGMHAGLEYEAKRFAELVMTRESKALRSIFFATTEM
KKDLGADAKPAAIKAVGVLGGGLMGAGISHVSVAKAKVLVRIKDVANDGVLNALNYNYKL
FDKQRQRKILSKAQLQAQMSQLSGGTDFVGFDRCDVVIEAVFEDLKLKQQMVADIEANAK
PSTIFATNTSSLPIHQIASQAQRPENIVGLHYFSPVEKMPLVEVIPHATTSDETIATVVA
LARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLMTGEPIENLDTALLDFGFPVGPITL
LDEVGVDIGAKIMPILVKELGPRFQGPDVFDVLLKDNRKGRKSGKGFYTYKGSKKKDVDK
SVYKLLKLTPESKLNDKDIAMRCLLPMLNEAVRCLDEGIIRSARDGDMGAIFGIGFPPFL
GGPFRYMDTLGLTKVVEMMNQHTEKYGERFAPCDGLLTRAGLGEKFYP
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggagaataagaaagcgtttcagctctcgtttgatgagcagcattacgcatggctagcg
attgatgtccctggtgagaaaatgaataccttgcaagcggcgtttgccgaagagatgcaa
gcggtatttacaatgctcaatgaaaagaaagggcaaattaaaggtctgattatccactct
cttaagccggataacttcattgcgggtgccgatgtgcgtatgttggaagcctgccaatcc
gtccacgaagcacaagcattggcttcacaaggtcagcagatgttccaacagcttgcggat
ctacctttccccgtggttgctgcgattcacggcccctgtctcggcggtggtttagaattg
gctctggcgtgtgattatcgagtctgtactgaagatgatgttactcgccttggcttaccc
gaagtgatgctgggtttgctgccgggttctggtggtacgcagcgcttgccacgcttgatt
ggtctgcttccggcgcttgatttgatcctaacaggcaaacagctgcgcgcgaaaaaagcc
aaaaaactcggcattgtggatgcgtgtgttccgcattctgtgttactggatgtagcaaag
cgtgtgttggaagaaaaagggcacaagaagcgtgcgcaaaccgcgttacccatcaaagaa
aaactgatggcgaatacggggttgggacgtaagttaatttttgatcaagctgccaagaaa
acgcagcagaaaacacgcggcaattaccctgcagcgcaagccattttagaggtgattcaa
tacggccttgaaaaagggatgcacgcaggtttggagtatgaagcgaagcgttttgccgaa
ttggtgatgacgcgagaatcgaaagcgcttcgttcgattttctttgccacgacagagatg
aaaaaagatctcggtgcggacgcgaaaccagcagcaattaaagcggtaggtgtgttgggt
ggcggtttgatgggggcgggcattagccatgtctctgtagcaaaagccaaagtgctagta
cgaatcaaagatgtggctaacgatggagtgctgaacgcgctcaattacaactacaagcta
tttgataagcaaaggcaacgcaaaattttgagtaaggcacagttgcaagctcagatgtcg
caactctctggcggtacggattttgtgggttttgatcgctgtgatgtggtgatcgaagcg
gtgtttgaagatctcaaacttaagcaacaaatggtggcagatattgaagccaacgcgaaa
ccttccaccattttcgcaaccaatacttcgtcattgccaatccatcaaattgccagccaa
gcgcagcgtccagaaaacattgtgggtctgcattacttcagcccggtggaaaaaatgccg
ctggtggaagtgatcccacatgccactacttcggatgaaaccattgcaacggttgtggca
cttgcgcgtaaacagggcaaaacgccgatcgtggtgaaagattgtgccggtttttacgtc
aaccgcattttagcgccatatatgaacgaagccgcgcaagtgttgatgacgggtgaacca
attgagaatctggataccgctttgctcgattttggttttccagtaggcccaatcactttg
ttggatgaagtgggggttgatattggcgcgaagatcatgccgattttggttaaagagctt
ggaccacgtttccaaggtccggatgtatttgatgtgctactcaaagacaaccgtaaaggc
cgtaagagtggcaaaggtttttatacttacaaaggcagcaagaagaaagatgtcgataaa
tcagtctataaactgctcaaattaacacctgagtctaagttgaatgacaaagatattgcg
atgcgctgcctgcttcctatgctcaacgaagcagtgcgttgtcttgatgaaggcattatc
cgcagtgcacgtgatggtgacatgggcgcgattttcggtatcggtttccctccattctta
ggtggccctttccgttacatggatacgcttggtttaacaaaagtggtagaaatgatgaat
cagcataccgagaaatatggcgaacgatttgcgccatgtgacggcctgctgactcgagcg
ggattaggtgaaaaattctatccgtaa
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