Vibrio mimicus: AL543_14365
Help
Entry
AL543_14365 CDS
T04381
Name
(GenBank) LysR family transcriptional regulator
KO
K10918
LysR family transcriptional regulator, transcriptional activator AphB
Organism
vmi
Vibrio mimicus
Pathway
vmi05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vmi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
AL543_14365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vmi03000
]
AL543_14365
Transcription factors [BR:
vmi03000
]
Prokaryotic type
Helix-turn-helix
LysR family
AL543_14365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AMG05270
LinkDB
All DBs
Position
2:complement(1741915..1742814)
Genome browser
AA seq
299 aa
AA seq
DB search
MQHNVSETMKLDDLNLFRLVVENGSYTSTSKKTMIPVATITRRIQALEDSLNLRLLNRHA
RKLTLTEAGERFYKDCSPLLERLASMTEEITDECRGASGRIRISAPSNLTKRMMMPMFNA
FMEKYPDIHIELMMSNQADDLDPTEWDVIFRVGPQRDSSLIARKIGEVKDILVASPTYLA
NHPQPTHAEELHQHQLLKGYPLLKWQLTNSQGETVVNTDRGRFQASALNVVRSACSEGLG
ITLMPDVMLREYLDDGSLVQVLSDWSSNPRDIYMLYNHKDHQPEKVRLFIDFVISYHLQ
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
ttgcaacataatgtgtcagaaacgatgaaactagatgacctaaacctctttcgactggtt
gtcgaaaatggaagctacacctcaacttcaaaaaaaaccatgattccggtggccaccatc
actcggcggatccaagccttggaggattcactgaatcttaggttactcaatcgtcatgca
cgtaaattgactctgaccgaggcaggcgaacgcttttataaagattgttctccattgcta
gagcgccttgcctctatgactgaggaaatcactgacgagtgccgtggtgcttctggacgc
attcgtatctctgcgccatcgaacctcaccaagcgaatgatgatgcccatgttcaatgcc
ttcatggagaaataccccgatatccatattgaactgatgatgagcaatcaagcggatgat
cttgatccaaccgaatgggacgttattttccgcgttgggccacaacgtgattcgagccta
attgccagaaaaattggtgaagtgaaagacattttggtggcaagcccaacctatttggcc
aatcacccgcagcccactcacgcggaagagttgcatcagcatcaactgctcaaaggctat
ccactactcaaatggcagctgactaacagtcagggagaaaccgtagtcaacacggatcgt
ggccgttttcaggctagtgcactgaatgtggtgcgaagtgcttgttcagaagggttaggc
attacgctgatgcccgatgtgatgctgcgcgagtaccttgatgatggtagtttggtccaa
gtgctttcggattggagctcaaacccgcgtgatatttatatgctgtataaccataaagat
catcagcctgaaaaagtacgcttgtttattgatttcgtgattagctatcacttgcagtaa
DBGET
integrated database retrieval system
