Vibrio mimicus: AL543_14390
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Entry
AL543_14390 CDS
T04381
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
vmi
Vibrio mimicus
Pathway
vmi03030
DNA replication
vmi03430
Mismatch repair
vmi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AL543_14390
03430 Mismatch repair
AL543_14390
03440 Homologous recombination
AL543_14390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vmi03032
]
AL543_14390
03400 DNA repair and recombination proteins [BR:
vmi03400
]
AL543_14390
Enzymes [BR:
vmi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AL543_14390
DNA replication proteins [BR:
vmi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AL543_14390
DNA repair and recombination proteins [BR:
vmi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AL543_14390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_4
AAA
AAA_22
RuvB_N
AAA_5
AAA_14
AAA_16
AAA_30
ResIII
AAA_2
AAA_18
AAA_assoc_2
AAA_19
PIF1
SKI
Mg_chelatase
TsaE
Motif
Other DBs
NCBI-ProteinID:
AMG04095
LinkDB
All DBs
Position
2:1745541..1747619
Genome browser
AA seq
692 aa
AA seq
DB search
MSYLALARKWRPTRFSEVVGQTHVLTALENALAQNRLHHAYLFSGTRGVGKTTIGRLFAK
GLNCETGITATPCGQCATCKEIDQGRFVDLLEIDAASRTKVEDTRELLDNVQYKPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKPISV
ENIQQQLDKVLQAEQITSDSKALNLLAHAADGSMRDALSLTDQAIALGNGVVKSDIVAHM
LGTLDTDHALHLLQAISQQTPQTVMECIETLAQNGVEWDGLLQQLSTQLHRIAMYQALPA
TLDKSVPEASRIESLAKVLTPQDVQLYYQIALKGRQDLPLSPTARIGIEMLMLRMMAFRP
SSVSLASVITPVNAQSKVSPVVAPAPMARPAPQAAVQTPQSQPVVQPPVPQPAQAMPNSM
VQPMMAAEPVMERAAPVVQREEAPMGTAVPNTDAQSQTTMPALAGLRHQLRSKRQEVQNK
GADGKKSDATSATPASALERIAQRAQQVQVSPDMSDEDELEPEDEIYQWRPMQPIEVSVK
SDVTPTQLKKALEHEKTPEMVAKLIEEAVAQDAWSALIQRLQTAKMVEQLALNSSFIRQG
EQISLTLRPSHAHLHNEKAQQELEQALNQVLGESCTLSIAVGQEGETPLELRERLYQQKL
TSALHSLQTDPHVQFIERRFNAQLDSDSVRPI
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcttgctttagcacgcaaatggcgtccgacacgattcagcgaagtagtcgga
caaacccatgttttaactgctttagagaacgcattggcgcaaaatcgtttgcaccatgcg
tatctgtttagtggaactcgaggtgtgggtaagaccactataggtcgtctgtttgcgaaa
gggctcaactgcgagacggggattacggcgacaccttgtggccagtgtgcaacctgtaaa
gagatcgatcaggggcgctttgttgatctgctagagattgacgcggcatcgcgtaccaaa
gtggaagacacgcgcgagctgctcgataacgtgcagtacaagccagcgcgtggacgcttc
aaggtttacctgatcgacgaagtacacatgctctcgcgtcacagctttaatgcgctgctc
aaaacgcttgaagagccgcctgagtatgtgaagtttttgctggcaaccacagatccacag
aaactgcctgtgaccatcttgtcacgctgtttgcagttccatcttaaacctatcagtgtt
gaaaatattcagcagcagcttgataaagtgctacaagccgaacagatcaccagcgacagc
aaagcgctgaatctgttagcacatgccgctgatgggagtatgcgtgatgcactgagccta
actgaccaagcgattgcattgggtaatggtgtggtgaaaagtgacatcgtcgcgcacatg
ctgggcacgctagacactgaccatgcgctgcatctgctgcaagccatcagccaacaaaca
ccgcaaacggtgatggagtgcatcgaaacgctcgcccagaatggcgtagagtgggatggg
ctattgcaacagctttctacccaattgcatcgaattgccatgtatcaagcgttgccagcg
actttggataaatcggtgcctgaagcatcaagaatcgagtcgcttgctaaagtgttaacg
ccgcaagatgtacagctttactaccaaattgctttgaaagggcgacaagatttgccgttg
tcacccacggcgcgaattggcattgaaatgctgatgcttcgcatgatggcgtttcgtccg
tcgagtgtatctctagccagtgtgatcacgccggtcaatgctcaatcgaaagtatcacca
gttgtcgcaccagcaccaatggctcgccctgcacctcaagctgcagttcaaacaccacag
tcacaacctgtagttcagccaccagtgccgcaacccgcacaagctatgccgaattctatg
gtacagcctatgatggctgcggagcctgtgatggaaagggctgctccggttgttcagcga
gaagaagcaccaatgggtacggctgtccccaatacggatgctcaaagccaaaccactatg
cctgccttagcagggctgcgtcatcagctgcgctctaagcgtcaagaagtacaaaacaaa
ggtgcggacggaaaaaagtctgacgcgacatctgctactcctgcatccgcgctagagcgt
attgcgcagcgagcacagcaagtgcaggtgtcgccagatatgagtgatgaggatgagctg
gagccagaagatgaaatttatcaatggcgtccaatgcaacccatcgaagtctcggtgaaa
agtgatgtcacaccgactcagctgaaaaaagcgttagagcatgaaaaaacgccagaaatg
gtggcgaagttgatcgaagaagccgtcgcgcaagatgcatggtcggctctgattcaacgc
ttgcagacggcaaaaatggtcgagcaattggcgttgaattcttcctttattcgtcaaggc
gaacagatttctctgacgctgcgtccaagccatgcacatctgcataatgagaaagcccag
caagagctagaacaagcgctgaatcaagtgcttggcgaatcttgtactttgagtattgcc
gtggggcaagagggcgagaccccccttgagctgcgtgagcggctctatcagcagaagctc
acttcggcacttcacagcttacagaccgatccgcatgtacaatttattgagcgtcggttt
aatgcgcagttggatagcgacagcgtacgtccgatttaa
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