Vibrio mimicus: AL543_15805
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Entry
AL543_15805 CDS
T04381
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vmi
Vibrio mimicus
Pathway
vmi03030
DNA replication
vmi03430
Mismatch repair
vmi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AL543_15805
03430 Mismatch repair
AL543_15805
03440 Homologous recombination
AL543_15805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vmi03032
]
AL543_15805
03400 DNA repair and recombination proteins [BR:
vmi03400
]
AL543_15805
Enzymes [BR:
vmi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AL543_15805
DNA replication proteins [BR:
vmi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AL543_15805
DNA repair and recombination proteins [BR:
vmi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AL543_15805
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AMG04353
LinkDB
All DBs
Position
2:complement(2043218..2043919)
Genome browser
AA seq
233 aa
AA seq
DB search
MFHSAIYWPARFSHLAQQAQQPVLQNFYAQPVIDGSTPICECPLVALDFETTGLNAQQDA
ILSIGLVPFNTQRIALNKAQYWLVQPTRPLEEGSVVIHGITHSELRHAQEPEVVLSELFD
ALRGKIVVAHFRHIEREFLRQATLNLWDEAVEFPIIDTLEIEHYVQNAQRSLWQRLLRRP
LNSVRLGQSRLRYGLPAYSPHHALTDAIATAELFQAQYAHHLRPETPIQSLWL
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgtttcattccgcaatttattggcctgcgcgattttcgcatttggctcagcaagctcaa
caacctgtgttgcagaacttttatgctcaaccggtgattgatggctcgacgccaatttgc
gagtgtcctttagttgcgcttgattttgaaacaacaggactgaatgcacagcaagatgcg
atcctcagtattggcttagttccatttaacacccaacgtatcgccctaaacaaagctcaa
tactggttagtacaacccactaggccactggaagaagggtccgttgtgattcacggcatc
acgcacagcgaactgaggcatgctcaagaacctgaagtggtacttagtgaactcttcgat
gcattacgtggaaaaattgttgttgcccactttcgccatattgagcgtgaatttctgcgc
caagcgacactgaatctttgggatgaagccgtagagtttcccatcattgatactttagaa
attgagcattatgtgcaaaatgctcaacgttctctctggcaacgcttgttgcgtcggcct
ttgaattcagttcggcttggtcaatcacgtttacgctatggccttcctgcttattcacca
catcatgcactgacggatgccattgccaccgctgagctttttcaagcgcaatatgcacac
catttgcgaccggagacccccatacaatcactttggctgtaa
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