Vibrio mimicus: AL543_18345
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Entry
AL543_18345 CDS
T04381
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
vmi
Vibrio mimicus
Pathway
vmi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AL543_18345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vmi03400
]
AL543_18345
Enzymes [BR:
vmi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AL543_18345
DNA repair and recombination proteins [BR:
vmi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AL543_18345
RecFOR pathway proteins
AL543_18345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_16
nSTAND3
AAA_14
AAA_22
AAA_3
Rad17
TIP49
NTPase_1
DUF815
AAA_18
AAA_17
Bac_DnaA
TniB
RNA_helicase
ABC_tran
Sigma54_activ_2
AAA_24
AAA_28
TsaE
NB-ARC
NPHP3_N
bpMoxR
AAA_PrkA
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
AMG04813
LinkDB
All DBs
Position
2:complement(2636705..2637709)
Genome browser
AA seq
334 aa
AA seq
DB search
MIEADRLIAPVNHTFKDEEVIDRAIRPKKLADYQGQDHVRDQMEIFIKAAQQRQEALDHL
LIFGPPGLGKTTLANIVANEMGVNIRTTSGPVLEKAGDLAALLTNLEENDVLFIDEIHRL
SPMVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIV
QRLEYYNVADLQNIVQRSAHCLGLSMDSEGALEVARRARGTPRIANRLLRRVRDYAEVKG
DGHICAQTADKALNMLDVDHQGFDYMDRKLLLAIMEKFSGGPVGLDNLAAAIGEEKDTIE
DVLEPFLIQQGYLQRTPRGRIATDRAYLHFGLEK
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagccgatcgtttaattgcccctgttaatcacaccttcaaagatgaagaagtg
attgatagagcgattcgtcctaaaaaacttgccgattatcaaggccaagatcatgtgcgt
gatcagatggagattttcatcaaagcagcacagcaacggcaggaagctttggatcatctg
ctgatttttgggcctccaggacttggtaaaaccactttggcgaacattgtggccaatgag
atgggtgtgaatatccgcacgacttctggtccagtgttagaaaaagcgggggatttagct
gctctgctgacgaaccttgaagaaaacgacgtcttatttatcgacgaaattcatcgtttg
agcccaatggtggaagaagtactctatcctgcgatggaagattaccaactggatatcatg
attggtgaagggcctgcagcacgttcaatcaaaatcgatcttcctccatttaccttgatt
ggagcaacaacccgagcaggttcgttgacatcaccattgcgtgatcgttttgggattgtg
cagcgtttggagtattacaatgttgctgacttgcagaacattgtccaacgcagtgctcac
tgtcttgggctttctatggacagtgaaggtgcgcttgaagtggctcgccgtgcccgcggt
acgccgcggattgccaaccgtctgctacgtcgtgtaagggattatgctgaagtcaaaggg
gatgggcatatttgcgcgcaaacggcggacaaagcactcaatatgcttgatgttgatcac
caaggtttcgactatatggatagaaagcttttactggcgattatggaaaagttttcaggt
ggccctgtggggttggataaccttgccgccgcaattggtgaagagaaagatacgatagaa
gatgttctagaaccatttctcattcagcaaggctatttacaacgaactccacgtggtcgt
atagccacagatcgagcatatctgcacttcggtcttgaaaaataa
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