Vibrio mimicus: AL543_18540
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Entry
AL543_18540 CDS
T04381
Name
(GenBank) lipid A ABC transporter ATP-binding protein/permease MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
vmi
Vibrio mimicus
Pathway
vmi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vmi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AL543_18540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vmi02000
]
AL543_18540
Enzymes [BR:
vmi01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
AL543_18540
Transporters [BR:
vmi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
AL543_18540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
ABC_ATPase
AAA_22
DEAD
RsgA_GTPase
AAA_24
APS_kinase
AAA_25
AAA_29
Zeta_toxin
AAA_21
SLFN-g3_helicase
MMR_HSR1
nSTAND3
RepB
ATPase
G-alpha
YobI-ATPase
AAA_15
Motif
Other DBs
NCBI-ProteinID:
AMG04849
LinkDB
All DBs
Position
2:complement(2679865..2681613)
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AA seq
582 aa
AA seq
DB search
MSLHSDETTWQTFKRLWTYIRLYKAGLAVAVVALIINAVADTYMISLLKPLLDEGFGNAE
SNFLRILPFMILGLMFVRGLSGFASSYCLSWVSGNVVMLMRRRLFNHFMHMPVRFFDQES
TGGLLSRITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSLVLIVVAPVVAF
AISVVSKRFRKISRNMQTTMGHVTSSAEQMLKGHKVVLSYGGQAVERKRFDQVSNSMRQQ
TMKLVSAQSIADPVIQMIASLALFAVLFLASVDSIRADLTPGTFTVVFSAMFGLMRPLKA
LTSVTSEFQRGMAACQTLFGLMDLETERDNGKYEVERVKGEVAVKDVTFTYQGKEKPALA
NVSFAIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSISLDGHDVRDYKLTNLRRHFA
LVSQNVHLFNDTIANNIAYAAEGVYTREQIEQAARQAHAMEFIENLPQGLDTVIGENGTS
LSGGQRQRVAIARALLRDAPVLILDEATSALDTESERAIQAALNELQKNKTVLVIAHRLS
TIEQADEILVVDEGEIIERGRHAELLAQDGAYAQLHRIQFGE
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttcactctgacgaaactacttggcagactttcaaacgtctgtggacttatatc
cgtttatacaaggcgggtcttgctgttgcggttgtcgcgctgattatcaatgctgtcgct
gatacctatatgatttctctactaaaacctttgctagatgaaggttttggtaatgcggaa
tccaacttcctgcgtatcctgccgttcatgattttaggcttgatgtttgtacgcggttta
agtggatttgcttcttcctactgcctgagctgggtttctggcaatgtggtgatgctgatg
cgtcgccgtttgtttaaccatttcatgcacatgccagtgcgctttttcgaccaagaatcg
acgggcggactgctatctcgcatcacttacgattctgagcaagtcgcaggcgcaaccagc
cgcgctttagtcagcattgtgcgtgaaggggcaagcattatcggtttgttaaccctgatg
ttctggaacagttggcagctttctttagtgttgattgtggttgcgcctgtagtggcgttc
gcgattagtgtggtttctaagcgttttcgtaagatctcgcgcaacatgcaaacgacaatg
gggcatgtgacttcatctgctgaacagatgctcaaaggtcataaagtggtgctcagttac
ggtggtcaagccgttgagcgtaaacgctttgaccaagtgagtaacagcatgcgtcaacaa
acgatgaagctggtttcggctcaatccattgctgaccctgtgattcaaatgattgcttca
ctagcgttgtttgccgtgttgttcttggcgagtgttgactcaattcgcgcagacctgaca
ccgggtaccttcactgtggtgttctccgctatgtttggcttgatgcgcccgctaaaagct
ttgaccagtgtaacgtctgaattccaacgcggtatggcggcttgccaaactctgtttggt
ttgatggatctggaaactgagcgtgacaatggcaaatacgaagtagagcgcgtcaaaggt
gaggttgccgttaaagacgtgactttcacttatcaaggaaaagaaaagccagcgttagcg
aatgtttctttcgccattccgcaagggaaaaccgtcgcactggttggtcgctctggttca
ggtaaatcgaccatcgccaatctgtttacccgtttttatgatgtagacagcggttcaatc
agccttgatggacacgatgtgcgtgactacaagctgactaatttgcgccgccattttgcg
ctggtttcgcagaacgtacacctgtttaacgacactattgccaacaatatcgcttatgcg
gctgaaggcgtgtacacccgtgagcagatcgaacaagccgcgcgccaagcacatgcgatg
gagtttattgaaaacctgccgcaaggtttggataccgtgattggtgagaacggaacgagt
ttgtccggcggtcagcgccagcgtgtggcgattgcccgtgcgttgctgcgtgatgctccg
gtgctcattctagatgaagcgacttcagcgctggatactgaatctgagcgcgcgatccaa
gcggcattgaatgagctacagaaaaacaaaaccgtgctggtgattgcgcaccgcttgtcg
accatcgaacaagccgatgagatccttgtggtagacgaaggtgaaatcattgagcgtggc
cgtcatgctgaattgttggcacaagatggcgcgtatgctcaactgcaccgcatccagttt
ggtgaatag
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