Vibrio mimicus: AL543_19190
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Entry
AL543_19190 CDS
T04381
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
vmi
Vibrio mimicus
Pathway
vmi00061
Fatty acid biosynthesis
vmi00071
Fatty acid degradation
vmi01100
Metabolic pathways
vmi01212
Fatty acid metabolism
vmi02024
Quorum sensing
vmi04146
Peroxisome
Module
vmi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
vmi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
AL543_19190
00071 Fatty acid degradation
AL543_19190
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
AL543_19190
09145 Cellular community - prokaryotes
02024 Quorum sensing
AL543_19190
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vmi01004
]
AL543_19190
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vmi04147
]
AL543_19190
Enzymes [BR:
vmi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
AL543_19190
Lipid biosynthesis proteins [BR:
vmi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
AL543_19190
Exosome [BR:
vmi04147
]
Exosomal proteins
Exosomal proteins of breast milk
AL543_19190
Exosomal proteins of breast cancer cells
AL543_19190
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Pept_S41_N
DUF4235
Motif
Other DBs
NCBI-ProteinID:
AMG04966
LinkDB
All DBs
Position
2:complement(2826619..2828319)
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AA seq
566 aa
AA seq
DB search
MDKPWLSRYPKDVPETINPDQYPSLVEMFEQSVHKYADQPAFMNMGAVMTFRKLEERSRA
FAAYLQNDLKLKKGDRVALMMPNLLQYPVALFGVLRAGMIAVNVNPLYTPRELEHQLNDA
DARAIVIVSNFANTLEQIVANTQVKHVVLTSLGQMLPRAKGTVVDFVVKYVKGMVPKYDL
PGAISMRKALHKGRRLQYVKPFMSGEDIAFLQYTGGTTGVAKGAILTHRNMVANVLQAKG
AYGPVLQEGRELVVTALPLYHVFALTVNCLLFIEMGGRNLLITNPRDIPGFVKELQKYPF
TAITGVNTLFNALVNNEDFHELDFKNMKLAVGGGMAVQRAVAERWKKTTGVHLLEGYGLT
ECSPLVTGNPYDLTDYTGAIGLPVPSTEVRIVDDAGNVVPNDQVGELQVRGPQVMQGYWQ
RPEATKEVLNAEGWLSTGDIVKFDDQGLIHIVDRKKDMILVSGFNVYPNEIEDVVALHGK
VLEVAAIGQANDVSGELVKIYVVKRDPSLTKDEVIAHCRKHLTGYKVPKLVEFRDDLPKT
NVGKILRRVLREENDAQLAAKAKQSA
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
gtggataaaccttggctttcacgttatccgaaagacgtaccggaaaccattaatcctgat
cagtacccatcactggtcgaaatgtttgaacaatcggtacataagtacgcggatcagcca
gccttcatgaacatgggcgcggtgatgacattccgtaagctggaagagcgcagccgtgca
tttgcggcttatctgcaaaatgatttgaaactgaagaagggtgaccgtgtcgccctgatg
atgccgaacttgctgcaataccctgtggcactgtttggtgtactgcgtgcaggtatgatc
gcagttaacgtgaacccactttacaccccacgtgagctagagcatcaactgaatgatgca
gatgcgcgcgctattgtgatcgtttcaaactttgccaacaccttagagcaaatcgttgcg
aatactcaggtgaagcatgtggttctgaccagcttgggacagatgctgccacgcgcgaaa
ggcacggttgtcgacttcgtagtgaaatacgtaaaaggcatggtacctaagtacgatctg
ccgggagcgatttcgatgcgtaaagcgctgcacaaaggtcgccgtctgcaatatgtgaag
ccgtttatgtcaggtgaagacattgccttcctacaatacaccggcggtacaacgggtgtg
gctaagggcgcgattctgactcaccgcaacatggtggcaaacgtgctgcaagccaaaggc
gcttacggccctgtgctgcaagagggtcgcgagttggtggtcaccgcactgccgctgtac
cacgtgtttgctttaaccgtaaactgcttgctgtttattgaaatgggtggccgcaactta
ttgatcactaacccgcgtgatattccgggctttgtgaaagagctgcaaaagtacccattt
acagccattaccggtgtaaacaccctgtttaatgcgctggtgaataacgaagatttccac
gagctcgacttcaaaaatatgaagctagcagttggtggcggtatggcagtacaacgcgct
gttgccgagcgttggaaaaagactaccggtgtccatttactcgaaggctatggtttgacc
gagtgttcgccactggtgaccggcaacccatacgatttgacggattacacgggcgcgatt
ggtttaccagtaccgtcaaccgaagtgcggattgtggatgatgcgggtaatgtggtgcct
aacgatcaagttggtgagctgcaagtgcgtggtccacaagtcatgcaaggttactggcag
cgtcctgaagcgaccaaagaagtgctcaatgctgagggatggctttcaactggcgatatc
gtgaaattcgatgaccaaggtttgatccacattgttgatcgtaagaaagacatgattctg
gtttcaggctttaacgtttatccgaatgaaatcgaagatgtggtggcgctgcacggcaaa
gtgctagaagtcgcagcgattggtcaggctaacgatgtttctggcgaattggtgaagatt
tatgtggtgaagcgcgatccaagcttgaccaaagacgaagtaattgctcactgtcgtaag
catttgactggctacaaagtaccaaaactggttgaatttcgtgacgacctgccaaaaacc
aacgtgggcaaaatcctgcgtcgtgtgctgcgtgaagaaaatgacgcacagttggcagca
aaggcgaagcaaagcgcataa
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