Entry |
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Name |
(GenBank) helicase domain protein
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KO |
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Organism |
vmo Vulcanisaeta moutnovskia
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:vmo00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
VMUT_0735
09124 Replication and repair
03420 Nucleotide excision repair
VMUT_0735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:vmo03021]
VMUT_0735
03400 DNA repair and recombination proteins [BR:vmo03400]
VMUT_0735
Enzymes [BR:vmo01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VMUT_0735
Transcription machinery [BR:vmo03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
VMUT_0735
DNA repair and recombination proteins [BR:vmo03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
VMUT_0735
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
complement(704484..707597)
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AA seq |
1037 aa
MRFRVVINGDVEIRREWPWDRVSRVKDRLKELGFRWNGEYWTGKVYSVSLIRELKDLLEL
TSEEVEKLMRAILVNSSGGVIGVEDLGSLGSIPNDCVLGEEGGLFIISLSCLIRDFIKND
RNHIGSVSSYEEYVDKAVESIRQLLIGKAVIGDVELALKRAREFALASNKLRELFMRRTE
WWTAKLSLDGAELHFLSRELYDKLRGLTIPYYVVDKEGNLNKYDLRLIRKDDIVRAEDKV
IIRFPVFIRETIKDMLVKSGYRVSEVPWSPRTIQIPKDEIKLLPFQEKALDSWLKAGKRG
TIVVPTGGGKTFIALKALAVTKVPTIILVITEELMNQWYERIMRHLGIKAGRLGGGFDDI
REVTVAIYNSAVNKIAEISDKFDMVVFDECLPYDALIVTDRGLMPIGEVVEKRLPVKVLT
HKGRFMRITNYFKIPLIKRLVRVTHERGEIVLTEDHLVLTKDGWKQAITLKRGDVVYFYD
VQMQNLRERIQDGSSPWGTLRDGSQLRASRDEVSETVATSQRRGSSANKEYGKNEGGEEI
SFITEIDGRTEGNSVRYGTWGWVSINSTTKGEECKTNGGSCFIPVRVLNVEVLETKKYRE
VATKVGKEYEVRGLRGRLQISNYLPSRANGDLQGGLRKWAENNNQGVPEYDKYSDSIGSL
VPGRWVNKYGEKWLYRNFSSYGGLYLEGEQGAGTVVKDELGPNIQHFTISQLLLPTYTEY
EGGEEIPGIDQTDSTGGISREGEFVYDIEVEEDHSFVADGVVVHNCHHVPADTFKEVAFR
LRAPFRLALSATPKRSDSNEHLIFLSSGDVVFQADYRDMVEARLVVPVRHFRIYVDLTPE
ERRDYERAGDNAIVLRNIASVASAKISITKEIVKAEVGIGSKIIVFTQFIRQAEELYKVL
KEELGPIITLITSKTSDRDSIFKAFARGAYKVIVATTVLDEGIDVPDADVAIILSGTGSR
RQMIQRIGRVVRASDDKVEARIYEVVARNTIEEALSEERHVKGEVLEIECRRYLADEIRR
LINHVISSTSLFKSSNP |
NT seq |
3114 nt +upstreamnt +downstreamnt
atgcgatttagggttgtcattaatggcgatgttgagattaggagggagtggccgtgggat
agggtatcgagggttaaggataggttgaaggagctgggctttaggtggaatggtgagtat
tggactggcaaggtttactcggtttcattaattagagagctgaaggacctgctggagctg
actagtgaggaggttgagaaattaatgagggctatactcgtaaactcgtcaggtggcgta
atcggtgtcgaggatttagggagtctcggatccatacctaacgactgtgtgttgggtgag
gagggtggcttattcattatttcactatcatgcctaatcagggatttcattaaaaatgat
aggaatcacataggcagtgtatcttcatatgaggagtacgttgataaagccgtggagagt
attaggcagttactcattggtaaggcggtgattggcgacgtggaacttgcccttaagagg
gctcgggagtttgccctggccagtaataagttgagggaattattcatgaggaggactgag
tggtggaccgccaagctcagccttgatggagccgagctacactttctatccagggaactt
tatgataagttgaggggtttgaccataccgtactacgtagttgataaggagggtaacctg
aataagtatgatttgaggcttatacgcaaggacgatatagtaagagctgaggataaagtc
atcattagattccccgtattcatcagagagacgattaaggacatgctggtaaagagtggc
tatagggtttctgaggtcccatggagtccaagaaccatacaaatacctaaggatgaaata
aagctcctaccctttcaggaaaaggccctcgattcctggctgaaggccggtaagagaggt
accatcgtcgtaccaaccggcggtggaaaaaccttcatagcactcaaagctctagccgtt
actaaggtaccgacaataatcctggtaattacggaggaattaatgaaccagtggtacgag
agaataatgaggcacttaggcataaaggcaggtaggctaggtggtggttttgacgatatt
agggaggtcactgtggcaatttacaactcagccgttaataaaatagcagaaataagcgat
aagttcgacatggtggtgtttgatgaatgcttaccttacgatgcattgatagtcacagat
agaggattaatgcccataggtgaggtcgtggagaagcgcttaccagtgaaggttctgacg
cataaaggacgctttatgcgtataacgaactacttcaagataccactcattaagaggtta
gtaagagttactcatgaaaggggagagatagtattaactgaggatcacctggtcctaact
aaggatggatggaaacaagcgataacgttaaagagaggcgatgtggtatacttttatgat
gtacaaatgcagaatttgcgggaaagaattcaagacggttcaagcccttgggggacatta
cgtgacggctcacaactcagagcttcaagggatgaggtctcagaaacggtggctacttca
cagagaagagggagttcagcaaataaggaatatggtaagaatgagggaggagaggagatt
agcttcattaccgagattgacggaagaacagagggaaatagtgttaggtacggtacttgg
ggatgggtatctatcaattccaccaccaagggcgaagaatgcaagactaacggtggttca
tgctttatcccagtacgagtacttaatgtggaagtactcgaaactaaaaaatatcgtgaa
gtcgccaccaaggttggaaaggaatacgaagtacggggcttacggggacgtctacagatt
tcaaactatctgccatccagagctaacggagatttacaaggtggcttacgtaaatgggcg
gaaaacaataaccagggagttcctgaatatgataaatactccgatagcattggcagtttg
gttcctggacgatgggtcaataagtatggggaaaaatggttatatcgcaatttctcttca
tacggagggttataccttgaaggagaacagggagctggtacagtagttaaagacgaattg
ggacctaacattcagcatttcacaatatcgcaattactacttcctacatacaccgaatat
gagggaggcgaagaaattcctggaattgatcaaaccgatagcactggaggcatttccagg
gaaggtgaattcgtttatgacattgaggtagaggaggatcatagtttcgtggctgatggg
gtagtagtgcataattgtcatcatgttcctgccgatacctttaaggaggttgcgtttagg
cttagagcgccgtttaggttggctttgtctgctacgccaaagagaagtgatagtaatgag
catttgattttcctgagttctggtgacgttgtgtttcaggctgattatagggatatggtt
gaggctaggttggttgttcctgttaggcatttcaggatatacgttgacctaacgcctgag
gaaaggagggactatgagagggctggtgataatgcgattgttctgaggaacatagccagc
gtagccagcgccaagattagtattactaaggaaatagtgaaggctgaggttggtattggt
agtaagattattgtcttcacacaattcataaggcaggctgaggagttgtataaagtcctt
aaggaagagttggggccaattattacattaataacctccaagacaagtgatagggactcg
atatttaaggcgtttgccaggggtgcgtataaggtcattgtggcgacaacggttcttgat
gagggtattgatgtgcctgatgcggatgtagcaattattctctccgggactggttcccga
aggcagatgatccagaggattggtcgtgttgttagggctagtgatgataaggttgaggcg
agaatctacgaagtagtggctaggaacaccattgaggaggcgctgagtgaggagaggcat
gttaagggtgaggttctcgaaattgagtgcaggagatacttggctgatgagattaggcgt
ttaataaaccacgtaattagcagtacgtcattatttaaatcgtcgaatccctga |