Vulcanisaeta moutnovskia: VMUT_2226
Help
Entry
VMUT_2226 CDS
T01440
Name
(GenBank) tRNA intron endonuclease, catalytic domain-containing protein
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
vmo
Vulcanisaeta moutnovskia
Brite
KEGG Orthology (KO) [BR:
vmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vmo03016
]
VMUT_2226
Enzymes [BR:
vmo01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
VMUT_2226
Transfer RNA biogenesis [BR:
vmo03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
VMUT_2226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
Motif
Other DBs
NCBI-ProteinID:
ADY02422
UniProt:
F0QXK7
LinkDB
All DBs
Position
2179455..2180048
Genome browser
AA seq
197 aa
AA seq
DB search
MVMDSGFLNIYIDGLCIVKEMKNQEKVVIVKRIGSDEYSLVKIDNGDLHELEDRGIGEVK
NDTFVLKPIELIYLSIIGYRVMINDNEVGVDELIREAKNPHALTVYLDMRKRGYFIKPVV
NGPVDFLVWDKGKSPVSSSPRYMIKIVTEGLGIQVMELLNVLKYSESMGAQLVLALVSSE
GVITYYKAFTFKPVKGG
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggatagtgggtttttaaatatttacattgatgggttatgcatagtgaaggaa
atgaagaatcaggaaaaggtagtaatcgttaagaggatagggtctgatgagtacagcctt
gttaagattgataatggagatttacatgaactcgaggatagaggtattggtgaggtaaaa
aatgataccttcgttctaaagcctatagagctcatatacctatccataattgggtacagg
gtgatgattaatgacaatgaggtgggtgtggatgagttaataagggaggcgaagaatccg
catgccttaacggtgtacctggatatgaggaagaggggttacttcataaaacccgtggtt
aatggaccggtggatttcctggtatgggataagggtaagagcccggtgagttcgagtccc
aggtacatgattaagatagtcactgaggggttgggtatacaggtaatggaattactaaat
gtgctaaagtacagtgagagtatgggtgcgcagttagtccttgcactcgtgagctccgag
ggggttatcacttattataaggcattcacatttaagcctgttaagggtggttaa
DBGET
integrated database retrieval system
