Vitreoscilla massiliensis: LVJ82_00980
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Entry
LVJ82_00980 CDS
T08422
Name
(GenBank) tape measure protein
Organism
vms
Vitreoscilla massiliensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMP_3
MscS_porin
Motif
Other DBs
NCBI-ProteinID:
UOO89589
LinkDB
All DBs
Position
complement(163715..168583)
Genome browser
AA seq
1622 aa
AA seq
DB search
MAKKFEAGLEIKADVKGTESVSRLADEIEAAGIDTSNLRREGAELTQQWQQLENNQKLIA
RFRELKLEARDVGQALEASKLKTAALAAEFNVSPSKSLEKQLQASIRETKSLTSQQESLN
QKVSQTRTAMADAGISTKNLHQTLKQLQAGSEAVKGKLAELTTEAQRLKTLAAARIQLGL
NIDEHARNELAATQQAFEELKRSGTLSQAELGRAAELHAQKVQMLERRLGIVSDEAKQLQ
RIAAAKTTLGLNVDDRARAEIQAVKQAYEDLKNSGTLSHEELGRAADLHNQKVRALEQSL
GIMSEEAKQLQRIAAAKTVLGFDVDDKASKELADVHTAYATLKASGILTNSQLERATERY
TAKVKALESQLGIVTEKTKRLNQLASDKAKLGLDIDERNVAEINAIQAAYERLKASGTLS
STQLARATELHRQKIRELKGEAASMPSAMNPIAESLQNIGKKAMALTGVTAGLYGVKESL
SAVLRTTQEFQAVRQRLDYAFGGVEEGGKQLDFVRNISNQLGLEVLGAAKGYGSLASATK
ELNITQQQTQQIFSGVAHAAAAMHLSADDANGVFLALSQIAGKGKVSMEELRQQLGERLT
PAMGIAAKSMGVTTAELEKMVESGISAEDFLPRFGAALEEVFAGEAAANANTLSGQINIL
KNQFNELLNGFGEGGIADAAIKVMQDIGESITWLETQMAGMDATVSGGIKDAFVGTYEGV
KEAGLTIAHLITSIVDRINAVGQAFNTLSGNADQDFDIVKSIIDGVNITIGVLRDGIAAL
GIGIDLVVGTSLGGFALMAEGLSKITFGDISKNFEEAAKGLSEASDKHFGKAHNAAMNFE
SKAVQAADRAIESEQQRFLRLETEAKAAYQAAAQAAIEAADKAKEAQDTANAAIGTDAEE
TATKQAAEANKVAVAAKVAAQKAQTEWTESAKKIGASDEEIAKVIKPLQEAGLAAKTTTK
ELEAMSPALKAAKGAADGMGINVRAAMSEISPAVSEAKKKIDLLQTGFKDMSAGGINAGS
VVSQAMAQMLEAAVNPADIEAVKQKWREFGATGAMSASQVEQGLMQAETKLQDINNTLNP
VNAALQNTTAKAKELPQALIGAKAAAQTLGVDITAAMNEPSMAMLTAQRNIDKIRAGFNE
MKASGMNAGAVVRGAIDEMLKAAANQSDIDLAKKKIKEFGTTGALSMRDVEQGIINANSR
LQEINNTLNPVNQAFEKLGIKTKEALGNSAKDMQAAFERVKDSGKATTDGLADGFKRAAD
AALASGDIQSKSWVRARAETYGYKVVIDDAGKASLQLAEDVKKSNAEQQAATKSTTEALK
QQAGATNGVASATKSATGTAKSYKAITWAIFDRSIINNAEAYKNMISAVREQMKYHPGGD
VLAFFKEYNRYVKIYQDQTERAQKATENLNQKIEAGTVNQKDLAAAVEATNARFGKLDST
TLKNLHEAIDKARQKIKAMRDEAEDTRAGLEAELASARGDETKREALEQQSKIRELNLKL
QEAEAAQNREAVGDYRNAIKLQEQIYAEKQRQAALEKERAQQQAEAERIAAEQAATQAQA
EQVPIEINVGTATVPVEATAGMANQIASALKNALAGRDQGLVDAAVSQFMNQILDEMKRM
GM
NT seq
4869 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaaattcgaggctggtttagaaataaaagccgatgtaaaaggcaccgagtca
gtatcgcggcttgcagatgaaattgaagctgctggtatagacacatccaatttaaggcgt
gaaggcgctgaattgacgcagcaatggcaacagttagaaaacaatcaaaaactgattgcc
cgctttcgcgagcttaaacttgaagcgcgagatgtgggccaagcacttgaagcctctaaa
cttaaaacagcggcattggctgccgagtttaacgtcagcccgtcgaaatcgcttgagaag
caactacaggcctccatcagagaaacaaaatcactgacaagtcagcaagagtctttaaat
caaaaagtatcgcaaacccgtaccgcaatggctgatgcgggcatttctactaaaaatcta
catcaaaccctgaagcaattacaggctggctccgaggcggtcaaaggcaaactggctgaa
ttaactactgaggcacagcgcttaaaaaccttggccgccgcacgcattcagctaggatta
aatattgatgagcatgctcgcaatgagttggccgctacgcaacaagcatttgaagaactg
aaacgcagcggcacactcagccaagccgaacttggccgcgcggcagaattgcacgcacaa
aaagtacaaatgttggaacgcagattgggcattgtgtctgacgaagcaaaacagttacag
cgcatcgcagcggcaaaaaccacattaggtttgaatgtcgatgaccgcgcgcgtgctgaa
attcaggctgtcaaacaagcgtatgaagacttaaaaaacagcggcacattgagtcatgag
gagcttggtcgcgctgccgatttgcacaatcaaaaagtacgggcattggaacaaagccta
ggcatcatgtccgaagaagccaagcaacttcaacgcattgcggcggcaaagacagtactt
gggtttgatgtggatgataaagccagtaaagaattggctgatgttcacacagcttacgca
acgctcaaagccagcggcattttgaccaattcacaattggaacgtgccaccgagcgttac
accgcaaaagtcaaagccttggaaagccaactcggcattgtcactgaaaaaaccaagcgc
ctaaatcaactggcatccgataaagcaaaactaggccttgacattgacgagcgcaatgtt
gccgaaatcaatgcaatacaggccgcttatgagcgtttaaaagccagtggcacattaagc
agtacacaacttgcgcgtgccactgaattgcaccgccaaaaaatacgcgaactcaaaggc
gaagccgccagtatgcccagcgcaatgaatcccattgcagagtcactgcaaaacattggt
aaaaaggcgatggcattaactggcgtcaccgctggtttgtacggggtcaaagaaagcttg
agtgcggtattacgtacaacacaagagttccaagccgtgcgccaacgccttgattatgct
tttggaggcgttgaagaaggtggtaagcaattggactttgtgcgcaatatttcaaaccaa
ttgggtttggaagtattaggtgccgctaagggctatggcagccttgcctcagccacaaaa
gaattgaatatcactcaacaacaaacacaacaaatattcagtggcgtggcccatgcagcc
gctgcaatgcacttatcggccgatgatgccaacggtgtgttcctcgcgttgagccaaatt
gccggtaaaggcaaagtcagcatggaggaattgcgtcaacagcttggtgagcgtttgaca
cctgcaatgggtatcgctgcgaagtctatgggtgtaaccactgcggaactggaaaaaatg
gttgagtctggcatcagtgctgaagacttcttgccaaggtttggcgcggcactggaagaa
gtatttgcaggagaagccgcagccaatgcaaatactttaagtgggcaaatcaacatacta
aaaaaccagtttaatgagttgttaaatggttttggcgaaggcggtattgcagacgctgca
atcaaggtgatgcaagacatcggtgaatccatcacgtggttggaaacgcagatggcgggc
atggacgccacagtatcgggtggtattaaagatgcgtttgtcggcacgtatgaaggcgtc
aaagaagcaggtctgaccattgcacatttaattacctcaattgtggatcgtattaatgcg
gttggccaggcatttaacacattaagcggcaacgcagatcaagattttgacatagtcaaa
agtattattgatggtgtgaatatcaccataggcgtgttacgggacggtatagcggcattg
ggtataggtatagatttggttgtaggcacatcattgggcggatttgctttgatggctgag
ggcttgtccaaaataacatttggtgacatttctaagaattttgaagaggcagctaaaggc
ttatcagaagcatcagataagcatttcggtaaggctcacaatgctgctatgaattttgag
tctaaagccgttcaggccgctgaccgtgcaattgaatcagaacagcaacggtttttacgt
cttgaaaccgaagctaaggcagcgtatcaagccgcggcacaggctgcaatagaggctgcc
gacaaggccaaggaggcgcaagacactgccaatgctgccattggtacagatgctgaagaa
accgcaacaaaacaagccgcagaagcgaataaagtcgctgtggccgctaaggtagccgcg
caaaaagcacaaactgaatggactgagtcagctaaaaaaattggcgcaagtgacgaagag
attgccaaggtcattaagcctttacaagaagctggcttggcggccaaaactactaccaaa
gaacttgaggcaatgtccccagcacttaaggccgccaaaggtgcagctgacggcatgggc
attaatgtacgtgctgcaatgagcgaaattagtccagcagtaagcgaagccaagaaaaaa
attgacctgttacaaactggcttcaaagatatgagtgctggtggaatcaatgcgggttct
gtagtcagccaagcaatggcccaaatgctagaagccgcggttaacccagccgacattgaa
gcagtcaaacaaaaatggcgtgaatttggcgctacaggtgcaatgtcggcaagtcaggtc
gaacaaggtttgatgcaagcagaaaccaagctgcaagacatcaacaacaccttgaaccca
gtcaacgcagcactgcaaaacaccacggcaaaagccaaagagttaccccaagccttgatt
ggtgcaaaagccgccgcgcaaaccttgggtgtggacatcaccgctgcaatgaatgaaccc
agcatggccatgctgacggcacagcgtaacatcgacaaaatccgtgctggcttcaatgaa
atgaaagccagcggcatgaatgccggtgctgtggtgcgtggtgcgattgacgagatgctg
aaagcggccgctaatcagtctgatattgaccttgctaagaaaaaaatcaaagagttcggc
acaaccggcgcgttgtccatgcgcgacgttgagcaaggcatcatcaatgcaaacagtcga
ttacaagagattaacaacactttaaaccctgttaaccaggcatttgaaaagcttggaatt
aaaacgaaggaagcattaggcaattcagccaaagacatgcaagccgcatttgaacgtgtc
aaagactccggaaaagcaacgactgatgggcttgcagacggctttaagcgcgcggcagat
gcagcactggcctcgggtgacatacaaagcaaatcatgggtacgagcacgcgctgaaaca
tacggctacaaagtagtcattgatgatgcgggcaaagcaagcttgcagcttgctgaagac
gttaaaaaatccaatgcagagcagcaagcggccactaaaagcaccacagaagctttaaaa
cagcaagcaggtgccaccaatggcgtggccagtgcgacaaaatcagcaactggcacagct
aagtcgtacaaagcgattacctgggcaatctttgaccgcagcatcatcaacaatgctgaa
gcatacaaaaatatgatttcagcagtgcgtgagcagatgaaatatcatccaggcggcgat
gtacttgcatttttcaaagagtacaaccgctacgtcaagatttatcaagaccagacagaa
cgcgcccaaaaagccactgaaaacttgaaccaaaaaattgaagccggcacagtcaaccaa
aaagacttagccgccgcggtagaagcaaccaatgcccgatttggtaagttggacagcacc
acacttaaaaacctgcatgaagccatagacaaggcacggcaaaagattaaagccatgcgt
gacgaggccgaagacacacgtgcaggcttagaagctgagttggcctctgcgcgcggcgat
gaaaccaagcgtgaagccttggaacagcaatccaagatacgtgagctgaatttgaaattg
caagaagccgaagccgctcaaaaccgtgaggctgttggcgattaccgcaatgcaatcaaa
ctacaagagcaaatttatgctgagaagcaacgccaagcagcacttgaaaaagaacgtgct
caacagcaagccgaagcagaacgcattgccgccgaacaagccgcgacacaagcgcaagcc
gaacaagtaccgattgaaatcaatgtcgggacggcaaccgttcctgtagaagccaccgca
ggtatggccaatcagatagccagtgctttgaaaaatgctttagctggccgtgaccaaggc
ttggtagatgcggctgtgagccagtttatgaatcaaattttagatgaaatgaaaaggatg
ggcatgtaa
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integrated database retrieval system
