Vitreoscilla massiliensis: LVJ82_01115
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Entry
LVJ82_01115 CDS
T08422
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
vms
Vitreoscilla massiliensis
Brite
KEGG Orthology (KO) [BR:
vms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vms03032
]
LVJ82_01115
03036 Chromosome and associated proteins [BR:
vms03036
]
LVJ82_01115
03400 DNA repair and recombination proteins [BR:
vms03400
]
LVJ82_01115
DNA replication proteins [BR:
vms03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LVJ82_01115
Chromosome and associated proteins [BR:
vms03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LVJ82_01115
DNA repair and recombination proteins [BR:
vms03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LVJ82_01115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Lmo2446-like_N
FliG_N
UBA_HYPK
Motif
Other DBs
NCBI-ProteinID:
UOO89615
LinkDB
All DBs
Position
complement(183501..183776)
Genome browser
AA seq
91 aa
AA seq
DB search
MNKTELIAAMAQEAGISKTEAERVLNAFTTTVQSSLKAGADVAISGFGTFAISESAERQG
RNPKTGESITIAAAKKPKFKAAKALKDTVNS
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaccgaattgattgcagccatggcccaagaagcaggcattagcaaaaccgaa
gcagaacgtgtgttgaatgccttcaccaccacagtgcaaagcagtttaaaagcgggtgcg
gatgtggcaatttcaggctttggcacgtttgcgatcagtgagagcgccgagcgccaaggc
cgcaatcctaaaactggtgagagcatcaccattgccgcggccaaaaagcctaaattcaag
gctgctaaggcattgaaagacactgttaacagttaa
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