Vitreoscilla massiliensis: LVJ82_01610
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Entry
LVJ82_01610 CDS
T08422
Name
(GenBank) type I secretion system permease/ATPase
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
vms
Vitreoscilla massiliensis
Pathway
vms02010
ABC transporters
vms03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
vms00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LVJ82_01610
03070 Bacterial secretion system
LVJ82_01610
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vms02000
]
LVJ82_01610
02044 Secretion system [BR:
vms02044
]
LVJ82_01610
Transporters [BR:
vms02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LVJ82_01610
Secretion system [BR:
vms02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
LVJ82_01610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
ABC_ATPase
AAA_29
AAA_16
AAA_22
SbcC_Walker_B
MeaB
AAA_18
Motif
Other DBs
NCBI-ProteinID:
UOO89713
LinkDB
All DBs
Position
284480..286663
Genome browser
AA seq
727 aa
AA seq
DB search
MNNIPDSSQRPQPDAPSAVPVTDNDQQAYQDWALSALIILAQFHGIAVNAADIQHRYDVN
GVGLDQSGWLLAAREIGLKAKVSHQKFERMHMAALPALVWREDGEHFILAKVDEERYLIQ
DLQQGRPVILSKEEFASRYSGVLMLVASRASIMGSLAKFDFTWFIPAVIKYRRIFMEVLA
VSVVIQLFALITPIFFQVVMDKVLVHRGFSTLDVIAFAFLVVIIFEVVLGGLRTYVFAHT
TSRIDVELGARLFRHMLSLPIAYFENRRVGDTVARVRELEQIRNFLTGQALTSVLDLCFS
FIFIAVMWYYSGWLTLIVLISLPCYAIWSATISPILRSRLNDKFARNADSQSFLVESVTT
MGTIKSMAVEPQMTRRWDQQLAAYVAAGFKVTRLATIGQQGVQLIQKLVVVATLWFGARL
VINGDMTVGQLIAFNMLAGQVAAPVIRLAQLWQDFQQVGISVARLGDILNTPTENPTSRM
ALPDIKGFIGFDRVSFRYRPDAPEILREFSLNIRAGEVLGIVGRSGSGKSTVTKLVQRLY
VPEHGRVMIDGNDLALADPAWLRRQIGVVLQENILMNRSVRDNIALADPGMPLERIMHAA
KMAGAHEFIMELPEGYDSMVGEQGAGLSGGQRQRIAIARALVGNPRILILDEATSALDYE
SERAIMNNMESICKGRTVIIIAHRLSTVRRCHRIIAMDKGKIIEQGTHKQLLEQNGYYKY
LHDLQAA
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgaataacatacccgattccagccaacgcccacagcctgatgcaccgtcggccgtacct
gtcacagataatgaccaacaggcttaccaagattgggccttgagcgctttaatcatctta
gcccaattccacggcatcgccgtcaacgcggctgatatccaacaccgctacgatgtcaac
ggagtaggcctcgaccaatcaggttggttactggcggcgcgtgaaattggtttgaaagcc
aaagtctctcaccaaaaattcgaacgcatgcacatggcggctttgccggctttggtatgg
cgtgaagatggcgagcactttatcttggccaaggtcgatgaagaacgctatttgattcaa
gatttgcaacaaggtcggccggtgattttgagtaaggaagaatttgctagccgctattcg
ggtgtgttgatgctggtagcctcacgcgcttccatcatgggttcgttggccaagtttgat
ttcacttggtttatccctgccgtcatcaaataccgccgcatttttatggaagtgttggcg
gtgtctgtggtcatacagctgtttgcactgattacgcccatcttctttcaagtggtgatg
gacaaggtattggtgcaccgcggcttctccactttggatgtgattgcgtttgcgtttttg
gtagtgataatttttgaagtggttttaggcggtttgcgcacgtatgtgttcgcccatact
acctcgcgcattgatgtggagctgggtgcgcgcttgttccgccatatgttgagtttgccg
attgcctattttgagaaccgccgtgtcggtgacacagtggcgcgagtgcgcgagctggag
caaatccgcaacttcctcactggccaagccttaacctcggtattggacttgtgtttctcg
ttcatctttattgcggtgatgtggtattacagtggctggttgactctgatcgtattgatt
tccctgccttgttacgccatttggtcggccaccatcagccccatcttgcgttcgcgtttg
aatgacaagtttgcccgcaatgccgacagccaatctttcctggtggaatcggtcacaacc
atgggcacgattaagtccatggcggtagaaccccaaatgacgcggcgttgggaccaacaa
ttggcggcttatgtcgccgccggtttcaaagtcacccgtttggccaccatcggccaacaa
ggggtgcagctgattcaaaaactggtggtagtggcaacgctgtggtttggtgcgcgtttg
gtcatcaatggcgacatgaccgtcggtcaattgattgcgtttaatatgttggctggtcaa
gtggccgcaccggtgattcgtttggcgcaattgtggcaagactttcaacaagtgggcatt
tcggtggcgcgcttgggcgacatcctcaataccccaactgaaaacccaaccagccgcatg
gctctacccgacatcaaaggctttatcggctttgaccgggtgtcattccgctaccgtccc
gatgcgccagagattctgcgcgaattcagtttgaacatccgtgctggcgaagtattgggc
attgttggccgttctggttcgggcaaatccaccgtgaccaaattggtgcagcgtttgtat
gtgccggaacacgggcgggtgatgatagacggcaacgacttggccttggccgatccagcg
tggctgcgccgtcaaatcggtgtggtgttacaagagaacatcttgatgaaccgcagcgtg
cgcgacaacatcgccctcgccgatccaggcatgccgctggagcgcatcatgcacgcagct
aaaatggccggtgcgcatgagtttattatggaattacctgaaggctatgattccatggtg
ggtgaacaaggagcgggtttatccggtggacagcgccaacgcatcgccattgcccgtgcc
ttggttggcaatccacgcatactgattttggacgaggccaccagtgcgctggactatgaa
tccgaacgcgccatcatgaacaatatggaaagcatttgtaagggccgcaccgtcatcatc
attgcgcacaggctgtcaacggtgcgccgttgtcaccgcatcatcgccatggacaagggc
aaaatcatcgaacaaggcacgcacaagcaattgttggaacaaaacggctattacaaatac
ctgcacgatttacaggccgcttaa
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