Vitreoscilla massiliensis: LVJ82_02320
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Entry
LVJ82_02320 CDS
T08422
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
vms
Vitreoscilla massiliensis
Pathway
vms03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LVJ82_02320 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vms03400
]
LVJ82_02320 (recC)
Enzymes [BR:
vms01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LVJ82_02320 (recC)
DNA repair and recombination proteins [BR:
vms03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LVJ82_02320 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
UOO89842
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All DBs
Position
435899..439261
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AA seq
1120 aa
AA seq
DB search
MLILHQSNRLEHLAQALASLLNSMPLDGLFEPETIVIQSQGMRRYLNRFLAQQNGIAANI
DFSLPARLMWQIMQQNLGTLPKLSPFATHVLHWRLMQLFEEAPFREQDSAAAAYLRQYMV
SRPEAYYDLAFILADIFDQYLIYRPDWIAQWQNGQLLDLDSDEAWQADLWRQLTAQESHH
GEHRLQLWQRLQAALPTAKLPERIWVFGITSMAPMYLELFRTLSQYTDVHIFAMNPSQAY
WGNIIEPATLLRQYGHMSEAELAVHNGHPLLASLGKQGRDFFDALTSDIDYDYQGEYFAR
NPDNTLLARLQNDLLDLHYPQPASSDRTQSGLKHPQLRDGSVIINSAHSPLRELQILKDH
IIASLAANPSWQLQDIVVLMPKVDAYLPFLEAVFGKHSPDGKALAYSVADVKLSRQQPLL
QAIQQFLSLMDSRFELLDLLPLLDAPAIQQRFGWDSEAVAVLHTVIRDLNIRWGLDAEMR
REFGGTDAAFTWQQGLERVVMGWLLPQHSAHHAWQDAVPYASEPTHWPLLAQLWQLVHGL
QQYHSDWQQPADVKTWVSRLQAAVSDLFVPLDTDVFALQQWQQHLADWLAQTELAQYHGV
LEFALVKRHVGAFLEQESQAGFLRGGITICSVVPMRGLPFKMLCLLGMNDGEFPRDTKAP
SFDLIYQDALHHRARKGDRSRRDDDRYLFLECLLNAREQLYISYIGKSIKNDDTLAASTV
VYEFIDTIAAMVGASSKDLLEGDGTEPAWIQTHPLQAFSQQYFKPNSDLRSYRQDLATAL
SAPPKTVGAFIDDTYLNGLQGERQQKIDVQLSMHEWLQFWKNPTRVWLRQQLGWTPTYGD
APWPEQEPFELERDPAALVYDAFYAARRANTSLQAAFEQVCHANLLPMGELAPLYASKMQ
QQVLSLESKWFSAQALPLLETEIQHRFDDGSVAQLHISLRHRTTEGQLFWMNHNPNFPEK
MAVWLTHLAYCACDDSDAPKTTTVLWAESPWQLQPLSADHARTLLLQSLNYWQLGQDQPL
PFFARTSLKTAKTWQEKAQADDTDMPEAAQKTAYLEYHGNKVQFAQADETEVALVFGALA
PDDEPIKRPLFADIVQQLCLPMYASISNLTPTTTGDAHES
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcttgcaccaatccaatcgccttgaacacttggcccaagctttggccagcttg
ctaaatagcatgcctttggacggtttgtttgaacctgaaaccatcgtcatccaaagccaa
ggcatgcgccgctacctcaaccgcttcttggcacagcaaaacggcattgccgccaacatc
gatttcagcctgcccgcacgtttgatgtggcaaatcatgcagcaaaacttgggcacgctg
cccaagctcagcccgtttgccacccatgtcttgcattggcggctgatgcaattgtttgaa
gaagcaccgtttcgcgagcaagacagcgccgccgctgcctatttgcgtcaatacatggtc
agccggcccgaagcctattacgatttggcctttatcttggcggacatttttgaccaatac
ctgatctaccgccccgattggatagcacaatggcaaaacggccagttattggatttggac
agcgatgaggcatggcaagcggatttgtggcgccaattgacggcacaagaaagccatcat
ggcgaacaccgtttgcaattgtggcagcgtttacaggccgcattgcccaccgccaaactg
cccgagcgcatttgggtgtttggcattacctcgatggcaccgatgtatttggagctgttt
cgcaccttatcgcaatacaccgatgtgcacattttcgccatgaaccccagccaagcctat
tggggcaacatcattgagcccgcgactttgctcagacaatatgggcacatgagcgaggcc
gaattggccgtgcacaatggccaccctttattggcctcattgggcaaacaaggccgcgac
ttcttcgatgccttaaccagcgacatagactacgactaccaaggcgagtatttcgcccgc
aatcctgataacacgctgctggcgcgtttgcaaaacgatttgctcgatttgcattatcct
caaccagccagcagcgacagaacgcaatcgggcttgaagcatccgcaattgcgcgatggt
tcagtcatcatcaacagcgctcacagcccgctgcgcgaattgcaaatcctcaaagaccac
atcatcgccagcttggccgccaaccccagttggcaattgcaagacatcgtggtgttaatg
cccaaggtcgatgcctatttgccgtttttagaagcagtgtttggcaaacacagccccgat
ggcaaggccttggcttactcggtggccgacgtcaaactcagccgccaacagccgttattg
caagcgatacagcaatttttaagcttgatggacagccgttttgaattgctcgacctcttg
cccttgctcgacgcccctgccatccaacagcgctttggctgggacagcgaagcggtggcg
gtattgcacaccgtcatccgcgatttgaacatccgttgggggctggatgccgagatgcgg
cgtgaattcggtggcaccgatgcggcgtttacatggcaacaaggtttggaacgcgtggtc
atgggttggctgttaccgcaacacagcgcacaccacgcgtggcaagacgccgtgccttac
gccagcgagcccacgcattggccgctgctggcacagttgtggcaattggtgcatggctta
cagcaataccacagcgactggcaacagcctgccgatgtgaaaacttgggtgagccgttta
caggccgctgtcagcgatttgtttgtgcctctggacaccgatgtgtttgccttgcagcaa
tggcaacagcatttggccgattggttggcgcaaaccgaattggcgcaataccacggtgtg
ttggaatttgccttggtcaaacgccatgtcggcgcatttttggagcaagaaagccaagcc
ggcttcttgcgcggtggcatcaccatttgttcggtggtgccgatgcgcggtttgccattc
aaaatgctgtgtttgctcggcatgaacgatggtgaattcccacgcgataccaaagcgccg
tccttcgatttgatttaccaagacgccttacaccaccgcgcgcgcaaaggcgaccgctcc
cgccgcgatgacgaccgctacttgttcttagaatgtctgctgaacgcacgcgaacaactg
tacatttcttacatcggcaaaagcattaaaaacgacgacaccctcgccgcctccaccgtg
gtatacgaattcatagacaccattgccgccatggtcggcgcttccagcaaagacttgctc
gaaggcgacggcaccgaacccgcatggatacaaacccacccattgcaagcgttttcccaa
caatactttaagccaaactcagacttgcgcagctaccgccaagacttggcaacagcctta
agcgcgccaccgaaaaccgtcggcgccttcatagacgatacttatttgaacggtttacaa
ggcgagcgccagcaaaaaatagacgtgcaattgtccatgcacgaatggctgcaattttgg
aaaaaccctacccgcgtgtggctgcgccaacaattgggctggacgccgacttatggcgat
gcgccgtggccagagcaagaaccgtttgaactggagcgcgaccctgcggcattggtttac
gatgcgttttatgccgccagacgtgccaatacctcgttacaggccgcatttgaacaagtc
tgccatgccaacttactgcctatgggcgaattggcaccgttgtatgccagcaagatgcag
caacaagtgttaagcctcgagtccaaatggtttagcgcgcaagcgttgcccttgttggaa
accgagatacaacaccgttttgacgatggcagcgtggcgcaattgcacatcagcttgcgc
caccgcaccactgaaggacagctcttttggatgaaccacaatcccaatttccctgaaaaa
atggcggtgtggctgacccatttggcctattgtgcttgcgacgacagcgacgcgcccaaa
accactaccgtgctatgggcagaaagtccgtggcaattgcagcctttgtcggccgaccat
gcgcgcacactgttgctgcaaagcctgaattattggcaactgggtcaagaccagcctttg
ccgtttttcgcccgtacctcactgaaaaccgctaaaacatggcaagaaaaagcccaagcc
gacgatactgacatgcctgaagccgcccaaaaaaccgcttatttggaataccacggcaat
aaggtgcaatttgcccaagccgatgaaaccgaggtagccttggttttcggcgcactcgcg
cccgacgacgaacccatcaagcggccattgtttgccgacatcgtgcagcaattgtgcctg
cccatgtacgcctccatcagcaatctcaccccaaccaccacaggagacgcgcatgagtca
tga
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