Vitreoscilla massiliensis: LVJ82_04310
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Entry
LVJ82_04310 CDS
T08422
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
vms
Vitreoscilla massiliensis
Pathway
vms03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LVJ82_04310 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vms03400
]
LVJ82_04310 (ung)
Enzymes [BR:
vms01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LVJ82_04310 (ung)
DNA repair and recombination proteins [BR:
vms03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LVJ82_04310 (ung)
Prokaryotic type
LVJ82_04310 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UOO90217
LinkDB
All DBs
Position
complement(831723..832394)
Genome browser
AA seq
223 aa
AA seq
DB search
MQTNVLTWQDTLALEKQQPYFQELVSKVNHERADGKTIYPPNAEVFHAFVATDLANIKVV
ILGQDPYHGPEQAHGLAFSVRKGVKIPPSLRNMYKELSTDIDGFQIPEHGDLNHWAEQGV
LLLNTVLTVEAGQAHSHAKWGWERFTDKVVDVINQYQQQVVFMLWGSHAQKKGAMIDRSR
HLVLESVHPSPLSAHRGFFGCRHFSQANQYLIQTGQAPIDWQV
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacaaatgttttaacttggcaagatactttggcgctggaaaagcaacagccctat
tttcaagaattggtgagcaaagtcaaccatgaacgcgccgatggcaaaaccatctaccca
ccgaatgcggaggtttttcatgcgtttgtggccacagatttggccaatatcaaagtggtg
attttaggacaagacccgtatcacggccccgaacaagcacatggtttggcattttcggtg
cgcaaaggcgtgaaaataccgccatcgttgcgcaatatgtacaaggaattgagcaccgat
attgacggttttcaaattccagaacatggtgatttgaaccattgggccgagcaaggggtg
ttgcttttgaacacggtcttgactgtagaagctggacaagcgcattcgcatgccaaatgg
ggctgggaacgattcaccgacaaggtggtcgatgtcatcaaccaataccagcagcaagtg
gtgtttatgttgtggggcagccatgcccagaaaaaaggcgcgatgatagaccggtcgcgc
catttggttttagaaagcgtgcacccatcgccattgtcggcacaccgtggatttttcggt
tgtcgccacttttcgcaagccaatcaatacttaatccaaacaggtcaagcgccaatcgat
tggcaagtttaa
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