Vitreoscilla massiliensis: LVJ82_08475
Help
Entry
LVJ82_08475 CDS
T08422
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
vms
Vitreoscilla massiliensis
Pathway
vms03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LVJ82_08475 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vms03400
]
LVJ82_08475 (mutS)
DNA repair and recombination proteins [BR:
vms03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
LVJ82_08475 (mutS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
HH_EMRA
Motif
Other DBs
NCBI-ProteinID:
UOO90983
UniProt:
A0ABY4E5D8
LinkDB
All DBs
Position
complement(1620101..1622698)
Genome browser
AA seq
865 aa
AA seq
DB search
MSAKPTVSPMMSQYFDIKQHHQDKLVFYRMGDFYELFFDDAVKASQLLDITLTSRGQLDG
EPIKMAGVPYHAAEQYLAKLVKLGESVAMVEQVGDVGASKGPVERKVVRIVTPGTLTDSA
LLDDKDSNRVLAIAKLKKQWAVAWASLQSGEFRCQLVHNSDLNHVLGRLNPAEVLLADGN
SVDLGSYASKATRLNAWQFDADSGRQLLLRYFEVQDLHGFGLEGDGYLPAIAAAGALLNY
INMTQPQMPKHLEALQCEQAQEYIQIDAASRRNLEISQTLSGKAAPTLLSSLDCCTTHMG
SRLLHTWLHQPLTRKAHILLRQQAISALLPHYADLQAAFKPLGDIERMAARIAVGSARPR
DLSGLRDGLRVLADLTVPAHADSSLLNTLVQVLPEGLPVAERLQAAVLPEPAVWLRDGGV
INHGFNAELDELRHIQTHGDEFLLDLEARERERTGLSTLKVEFNRVHGFYIELSKAQAEQ
APADYQRRQTLKNVERYITPELKVFEDKVMSAQDQALALEKRLFDELLCELQAALPLLQR
IAKAAASLDVLAALAKTAATELWVAPELVDFPCVEIRQGKHPVVAAQVAQFIANDARLDG
KHKLMLLTGPNMGGKSTFMRQTALIVLLAHVGSLVPAQSARIGMVDQIFTRIGASDDLAG
NRSTFMVEMSESAYILNHASERSLVLMDEVGRGTSTFDGLALAQAIAEYLLQKNKSLTLF
ATHYFELTKLPERFQDAFNMHLNALEQGQDIVFLHQVEAGPANKSYGVAVAKLAGFPTKA
LHSAQQYLQQLEQKQREQQAQLGLFQDWEAEDSLAPQSHNTPVSSDEPEPYAACIETLQN
LQPDELTPRAALDALYKLQALLPEV
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaaaacccactgtttcaccgatgatgagccaatattttgacatcaaacaacac
catcaagacaagctggttttttaccgcatgggcgacttttacgagctgttttttgacgat
gcggtcaaagcgtcgcaattgctcgacatcaccttgaccagtcgtggccaattggatggc
gagccaattaaaatggcgggggtgccttaccatgcggctgagcagtatttggccaaactg
gtgaaactgggcgaatccgtcgccatggtggaacaagtcggcgatgtgggtgccagcaaa
gggccagtagagcgcaaagtggtgcgcattgtcacgccggggactttgaccgacagcgcc
ttgttggacgacaaagacagcaatcgggtgctggcgattgccaaattgaaaaaacagtgg
gcggtggcgtgggcgtcgttgcaaagcggtgagtttcgctgtcaattggtgcacaacagt
gatttaaaccatgtgttggggcgtttgaatcccgccgaggtattgttggccgacggtaac
agtgttgatttgggcagctatgccagcaaagccacacgtttgaatgcgtggcagttcgat
gccgacagcggtcggcaattgctgttgcgctattttgaagtgcaagacttacacggcttt
ggtttggagggcgacggctatttgcctgccatcgctgccgccggtgccttgctcaattac
atcaacatgacgcagccacaaatgcccaagcatttggaagccttgcaatgcgaacaagcg
caggaatacatccaaatcgatgccgccagccgtcgcaatttggaaatcagccagacctta
agtggcaaagctgcgcccactttattgtcgagtttagattgttgtaccacccacatgggc
agccgtttgttacatacgtggttgcatcaacctttaacgcgcaaagcgcacatcttattg
cgccaacaagcgattagcgctttattgccgcattacgccgatttacaggccgccttcaaa
cccttgggcgacatcgaacgcatggcagcgcgcatcgctgtgggcagtgcacggccacgg
gatttatcgggtttgcgcgatggcttacgcgttttagccgatttgacggtgccggcacat
gccgacagcagtttgctcaataccttggtgcaagtcttgcctgaaggtttgccagtggcc
gaacgtttacaggccgcagtcttgcctgagccggcggtatggttgcgcgatggtggcgtg
attaaccatgggttcaatgccgaattggacgaattgcgccacattcaaacccacggagat
gagtttttgctggatttggaagcgcgagagcgggaacgcacgggcttgtccacgctcaag
gtggaattcaaccgtgtgcacggcttttacattgaattgtccaaagcgcaagccgagcaa
gcacctgccgattatcagcgccgtcaaaccttgaaaaacgtcgagcgctacatcacgccc
gaactcaaggtgtttgaagacaaggtaatgagtgcacaagatcaggccttggccctagaa
aaacgcttgtttgacgagttgctgtgcgaattacaggccgcattgcccttgctgcaacgc
attgccaaggccgcagccagtttggatgtattagcggctttggccaagactgcggcaacc
gagttgtgggtagcgccggaattggtggatttcccatgtgtggagatacgccaaggcaaa
catccggtggtggcggcgcaagtggcgcaattcatcgccaacgatgcgcgcttggatggc
aaacacaaattgatgctgcttaccggcccgaacatgggcggtaaatcgacgtttatgcgc
caaaccgcgttgattgtgttgttggcgcatgtgggctctttggtgccggcacaatcggcg
cgcataggcatggtcgaccaaattttcacccgcatcggtgcttcagatgatttggccggc
aaccgctcgacgtttatggtagaaatgtcggaatcggcttatattttgaaccatgccagc
gaacgctccttggtgttgatggatgaggttggtcgcggcacgtcgacgtttgatggtttg
gccttggcgcaagccatcgccgaatacctgctgcaaaaaaacaaatcgctgacgctgttt
gccacgcattattttgaattgaccaaattgcctgagcgctttcaagatgcgtttaacatg
catttgaatgccttggagcaaggccaagacatcgtgtttttgcaccaagtcgaggctggg
ccggccaacaagagttacggtgtggcagtggccaaattggcgggttttccgaccaaggct
ttacattcggcgcaacaatatttacaacaattggaacaaaaacaacgtgagcaacaggca
caattgggcttgtttcaagattgggaagccgaggacagcttggcgccgcagtcgcacaac
acgcctgtcagcagcgatgaacctgagccatatgcggcctgtattgagactttgcagaat
ttgcaaccagacgagttaacgccgcgtgctgctttggacgccttgtacaaattgcaggcc
ttattgcccgaagtttga
DBGET
integrated database retrieval system
