Vitreoscilla massiliensis: LVJ82_08955
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Entry
LVJ82_08955 CDS
T08422
Symbol
ddlA
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
vms
Vitreoscilla massiliensis
Pathway
vms00470
D-Amino acid metabolism
vms00550
Peptidoglycan biosynthesis
vms01100
Metabolic pathways
vms01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
vms00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LVJ82_08955 (ddlA)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LVJ82_08955 (ddlA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
LVJ82_08955 (ddlA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vms01011
]
LVJ82_08955 (ddlA)
Enzymes [BR:
vms01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
LVJ82_08955 (ddlA)
Peptidoglycan biosynthesis and degradation proteins [BR:
vms01011
]
Precursor biosynthesis
Amino acid ligase
LVJ82_08955 (ddlA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
ATPgrasp_ST
RimK
Motif
Other DBs
NCBI-ProteinID:
UOO91077
LinkDB
All DBs
Position
complement(1704519..1705619)
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AA seq
366 aa
AA seq
DB search
MSKLRVGVVFGGKSAEHEVSLQSAKNIVEAMDKNRFDVVLFGVDKQGQWHVHDINDYLLN
ANNPSNIALNPSSTAVAQVLGKPQNQLIDAGNANPLGKVDVIFPIVHGTLGEDGSLQGML
RLANLPFVGSDVLGSAVCMDKDVCKRLLRDAGLKVAPFITLNRSQRHSVDFAAATAKLGL
PLFVKPANQGSSVGVSKVKTAEQYQQALDLAFEFDHKVLIEQGIVGREIECAVLGNEQPQ
ASTCGEVVLSSEFYAYDTKYISEDGARVEIPAAIPAEVNEAIRQVAVAAYTTLGCCGMAR
VDVFLTADNEIIINEINTLPGFTNISMYPKLWEASGLAYTDLITRLIELAIERHALDNSL
KSSMTA
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaattgcgagtgggtgtggtgtttggcggcaaatcggcagaacatgaggtgtca
ttgcaatcggccaaaaacatcgtcgaagccatggataaaaaccgcttcgatgtggtgtta
ttcggggtagacaaacaaggccaatggcatgtacacgacatcaacgattatttgctcaat
gccaacaaccccagcaacatcgccctcaatccttcttctactgccgtggcgcaagtattg
ggcaaaccgcaaaaccaactgatagacgcgggtaatgccaatcccttgggcaaagtcgat
gtgattttcccgattgtgcacggtactttgggcgaagatggctctttgcaaggcatgttg
cgcttggccaatttgccctttgtcggctcagatgtgttgggttcggccgtgtgcatggac
aaagacgtgtgcaaacgtttgctgcgcgatgccggcctgaaagtcgcaccgttcatcacc
ctcaatcgcagccaacgccacagcgtcgactttgctgccgccaccgccaaattgggcttg
ccgctgtttgtgaaaccggccaaccaaggctcatcggtaggcgtaagcaaggtcaaaacc
gccgaacaataccagcaagcactggatttggcgtttgaatttgaccataaagtcttgatt
gaacaaggcattgttggccgcgaaattgaatgtgcggtacttggcaatgagcagccacaa
gccagcacttgcggtgaagtggtattgagcagcgagttttatgcttacgataccaaatac
atcagcgaagacggcgcgcgtgtggaaatccctgccgccattcctgccgaagtcaacgaa
gccatacgccaagtggcggttgccgcttacaccacattaggctgttgtggcatggcacgc
gtcgatgttttcctcaccgctgacaatgaaatcatcatcaacgaaatcaacactctgcca
ggctttaccaacatcagcatgtacccgaaattgtgggaagccagtggcttggcctatacc
gatttgattacacgcttaatcgaattggcgatagaacgccatgccttggacaacagcctc
aaaagctctatgacggcttaa
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