Vitreoscilla massiliensis: LVJ82_11670
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Entry
LVJ82_11670 CDS
T08422
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
vms
Vitreoscilla massiliensis
Brite
KEGG Orthology (KO) [BR:
vms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vms03021
]
LVJ82_11670 (rpoH)
Transcription machinery [BR:
vms03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LVJ82_11670 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
HTH_3
RNase_J_b_CASP
HTH_PafC
Motif
Other DBs
NCBI-ProteinID:
UOO88144
LinkDB
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Position
complement(2257733..2258593)
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AA seq
286 aa
AA seq
DB search
MNQAFALPVPSGHATLEQYIHTVNSIPLLSAEEEHDLAQRHALEDDLEAAKKLILAHLRV
VVSIARGYDGYGLNQADLIQEGNIGLMKAVKRFEPNRGVRLFSFAVHWIKAEIHEFILRN
WRLVRVATTKPQRKLFFNLRSMRKNMNALSDVEAQQIADDLGVKLSEVFEMEQRMTGKDV
ALLAENDDDENSFAPIDWLTDNDSEPTQMLAQQAHHQLQTEGLQGALSQLDDRSRHIVES
RWLQDDGGLTLHDLAATYGVSAERIRQIEAKALQKLRGFLGDAVAA
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaagcttttgctttgcctgtaccaagcggtcatgccactttggagcagtacatt
cacactgtgaacagcatccctttgctgagtgctgaggaagagcatgatttggctcaacgc
cacgccttagaagacgacttggaagctgccaaaaaattgattttggcgcacttgcgcgtg
gtggtatcgattgcccgtggttatgatggctatggtttgaaccaagccgatttaattcaa
gaaggcaatatcggcctgatgaaagccgtaaaacgctttgagccaaaccgtggcgtgcgt
ttgttttcttttgcagtacactggattaaagctgaaatccacgaattcattttgcgcaac
tggcgtttggtgcgtgttgccaccaccaaaccacaacgcaaattgttcttcaacttgcgc
agcatgcgtaaaaacatgaatgctttgagcgatgttgaagcacagcaaattgccgacgat
ttgggcgtgaaactctcggaagtattcgagatggaacaacgcatgaccggtaaagacgtg
gctttgttggcggaaaacgatgacgatgaaaacagcttcgcgcccattgattggttgacc
gacaacgacagcgaaccaacccaaatgttggcgcaacaagcgcatcaccagttgcaaacc
gaaggcttgcaaggcgcgttgtcacaattggatgaccgttcacgccacatcgtcgaatca
cgttggttgcaagacgatggtggtttgactttgcacgatttggccgccacttatggcgtg
tctgctgagcgcattcgtcaaattgaagccaaagccttgcaaaaattgcgcggtttctta
ggcgatgcggttgcagcttaa
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