Vitreoscilla massiliensis: LVJ82_12155
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Entry
LVJ82_12155 CDS
T08422
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
vms
Vitreoscilla massiliensis
Brite
KEGG Orthology (KO) [BR:
vms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vms03032
]
LVJ82_12155
03036 Chromosome and associated proteins [BR:
vms03036
]
LVJ82_12155
03400 DNA repair and recombination proteins [BR:
vms03400
]
LVJ82_12155
DNA replication proteins [BR:
vms03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LVJ82_12155
Chromosome and associated proteins [BR:
vms03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
LVJ82_12155
DNA repair and recombination proteins [BR:
vms03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
LVJ82_12155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
NNH1
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
UOO88235
LinkDB
All DBs
Position
2370886..2371200
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AA seq
104 aa
AA seq
DB search
MTKSELMLRLAELVAAQKGTQLVAKDVEHSVKVLVDTMTRSLAKGQRIEIRGFGSFDLNH
RPARVGRNPKTGDKVEVPEKYVPHFKPGKELRERVDQALQNVAD
NT seq
315 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatctgagttgatgttacgcttggcagagctagttgctgcccaaaaggggact
caattggtcgccaaagatgtggagcacagtgttaaggtgttagttgacaccatgacacgt
tcattggccaaaggccaacgcatcgagattcgcggcttcggtagtttcgatttgaaccac
cgcccagcgcgcgttggtcgtaaccctaaaacgggcgataaagtggaagtacctgaaaaa
tatgtacctcactttaaaccaggtaaagagttgcgcgagcgtgttgatcaagctttgcaa
aatgtagctgactga
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