Vitreoscilla massiliensis: LVJ82_12760
Help
Entry
LVJ82_12760 CDS
T08422
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
vms
Vitreoscilla massiliensis
Brite
KEGG Orthology (KO) [BR:
vms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vms03016
]
LVJ82_12760 (truA)
Enzymes [BR:
vms01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
LVJ82_12760 (truA)
Transfer RNA biogenesis [BR:
vms03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LVJ82_12760 (truA)
Prokaryotic type
LVJ82_12760 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
YibY
Motif
Other DBs
NCBI-ProteinID:
UOO88340
LinkDB
All DBs
Position
2500692..2501495
Genome browser
AA seq
267 aa
AA seq
DB search
MSTTRIALILHYDGSAFNGWQVQPAGVPTVQTVLEHALAKIALHPVATIVAGRTDTGVHA
TAQVVHFDTTATRPLSAWVRGINAHLPSSVAVQAAYEVSPEFSARFDAYRRSYRYVLCNE
AVRPVILAGKVGWAFRDLSVAAMQQAAVCLVGEHDFSSFRASECQAKSPIKTMYSVNIHS
HDSMVCFDFQANAFLHHMVRNLVGALVYVGYGKLSVADFAALLAAKDRTLAPPTFMPDGL
YLTGVDYPEHFGVPRATIPAWLWGQTT
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgtctactacccgtatcgccctgattttgcactatgacggcagcgcttttaatggctgg
caagtgcaacccgctggtgttcccaccgtacaaaccgttttagaacacgccttggccaaa
atcgccctgcatccggtcgccaccattgttgccggtcgcaccgataccggcgtgcacgcc
acggcgcaagtggtgcattttgacaccactgccacacggcctttgtcggcgtgggtgcgt
ggcatcaatgcccatttgcccagcagtgtggccgtacaggccgcttatgaggtgtcaccc
gaattcagtgcccgttttgatgcctatcgccgctcttaccgttatgtgttgtgcaatgaa
gcggtgcgtccagtcatcttggccggtaaagtcggttgggcatttcgcgatttgagtgtt
gctgcaatgcagcaagcggcggtatgcttggtgggggaacatgatttttccagctttcgg
gcatctgagtgtcaggccaaatcaccgattaaaaccatgtacagcgtcaacattcacagc
catgacagcatggtgtgttttgattttcaggccaatgcgtttttgcaccacatggtgcgc
aatttggtcggcgctttggtgtatgttggttatggcaagctcagtgtggcggatttcgcc
gccttattggcggccaaagaccgcactttggcgccgccgaccttcatgcccgatggtttg
tatttaaccggtgtcgattatcccgagcattttggtgtgcctcgtgccaccataccggct
tggttgtggggacaaacaacatga
DBGET
integrated database retrieval system
