Vitreoscilla massiliensis: LVJ82_12855
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Entry
LVJ82_12855 CDS
T08422
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
vms
Vitreoscilla massiliensis
Brite
KEGG Orthology (KO) [BR:
vms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vms03016
]
LVJ82_12855
Enzymes [BR:
vms01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
LVJ82_12855
Transfer RNA biogenesis [BR:
vms03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
LVJ82_12855
Prokaryotic type
LVJ82_12855
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
UOO88358
UniProt:
A0ABY4DXV8
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All DBs
Position
complement(2520962..2521930)
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AA seq
322 aa
AA seq
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MLDLQFLGTSAGIPTKSRNVTALAVGQTANKPWLLIDCGEATQQQLLHTHWSANTLSAIC
ITHVHGDHCYGLPGMLASAGLNKRTQPLTIIAPLPLWQWLEHTIALTDLFLSFELQFVDV
TTLLEERFYVDDFEISAVALSHRVPSYAYKIRHRREVRQLDRDALFAHGLPAGPLWGMLQ
NGQDVYYEGRNYPASLYLEQHEQRVCALIGGDNDSPSLLQAACDGVQVLVHEATYTQDIA
DKVGAFPMHSSAKQTAEFAYQAAIPNLVLTHFSARYGDAQALEPLLAEAKRYYHGHVHLA
EDFAQYRLLPSGEFQPLTTRDA
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgttagatttgcaatttttaggcacctccgccggcattcccaccaaaagccgcaatgtc
accgccttggccgtaggccaaaccgccaataagccgtggctgctcatcgattgtggtgaa
gcaacacaacagcaattgctgcacacgcattggtcggccaataccttaagcgcgatatgc
atcacccatgtgcacggcgaccattgttatggcttgccgggcatgctcgccagtgccggc
ctgaacaaacgcacccaacctttgaccatcatcgcaccgctgcctttgtggcaatggctg
gagcacaccatcgcgctgaccgatttgtttttgtcgtttgaattgcaatttgtcgatgtc
accactttgctggaggagcgcttttatgtcgatgattttgaaatttcggccgtggcctta
agccaccgcgtgcccagttatgcctataaaatccgccaccgccgcgaagtgcgccaactc
gaccgcgatgctttgtttgcgcacggcttgccggcagggccgctgtggggcatgttgcaa
aacggccaagacgtgtattacgaaggccgcaactaccccgcctcgctgtatttggaacaa
cacgaacagcgtgtgtgtgccttaattggcggcgacaatgacagcccaagtttgttacag
gccgcttgtgacggtgtgcaagtgctggtgcatgaagcgacgtacacgcaagacatcgcc
gacaaagtgggcgcgtttccgatgcacagctcagccaaacaaactgccgaatttgcctac
caagcggcgataccgaatttggtcttgacccatttcagcgcccgttatggcgatgcacaa
gccttagagcctttattggccgaagccaagcgctattaccatggccatgtacacttggct
gaagactttgcgcaataccgtttgctgcccagcggcgaattccaacccttaacaacgaga
gacgcatga
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