Vitreoscilla massiliensis: LVJ82_13335
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Entry
LVJ82_13335 CDS
T08422
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
vms
Vitreoscilla massiliensis
Pathway
vms00300
Lysine biosynthesis
vms01100
Metabolic pathways
vms01120
Microbial metabolism in diverse environments
vms01230
Biosynthesis of amino acids
Module
vms_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vms00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LVJ82_13335 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vms01002
]
LVJ82_13335 (dapE)
Enzymes [BR:
vms01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
LVJ82_13335 (dapE)
Peptidases and inhibitors [BR:
vms01002
]
Metallo peptidases
Family M20
LVJ82_13335 (dapE)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
UOO88443
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All DBs
Position
2613136..2614272
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AA seq
378 aa
AA seq
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MTTNPTLALTKQLMARASVTPLDEGCQQILIDRLTALGFVAERLRFGDTDNIWLRRGTAA
PLTCFAGHTDVVPTGPLEQWQSDPFVPVERDGKLYGRGAADMKTSIAAFVTACERLLTEQ
PDYPASIALLITSDEEGDAHDGTTKVVDLLKERGELIDYCIVGEPTSTAQLGDTIKNGRR
GSLSGNLTVIGKQGHIAYPHLAINPVHTFAPALLALTQEVWDEGNEYFPATSFQVSNIHA
GTGATNVIAGSLNVKFNFRFSTEVTADELKQRVHAILDEHGVNYDLQWSLSGQPFLTGAG
RLTEVAQAAIAAETGVQAELSTTGGTSDGRFIKAIARELIELGPINASIHQIDEHVNVAD
IEPLSHIYQRILQQLATA
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgaatcccaccttggcattgaccaagcaattgatggccagagcatcggtaacg
ccgcttgatgaaggttgccaacaaatcttaatcgacagactgactgcgctcggctttgtg
gctgagcgtttgcgttttggggataccgataatatttggttgcgccgtggcaccgccgca
ccgttgacctgttttgctggccacaccgatgtggtgccgactggcccgttagaacaatgg
caatccgatccattcgtgccggtagagcgcgatggcaaattgtatggccgcggtgctgcc
gacatgaagacctcgattgctgcatttgtgaccgcgtgtgagcgcttattgactgagcaa
ccagattatccagccagcatcgccttgctgattacctcagacgaagagggcgatgcccac
gatggcaccaccaaagtggtggatttattaaaagagcgcggcgagctgattgattactgc
attgtcggtgaacccaccagcacggcacaattgggcgacaccatcaaaaatggtcgccgt
ggttcgctctccggtaatcttaccgtcatcggcaaacaaggccacatcgcttacccacat
ttggccatcaatcccgtgcacacgtttgcaccagccttgctggcgttaacgcaagaagtg
tgggatgagggcaatgagtattttccagccaccagttttcaagtgtctaacatccatgcc
ggcactggtgcgaccaatgtcatcgctggcagtttgaatgtgaaattcaatttccgcttc
agcaccgaagtgacggctgacgaactcaaacaacgtgtgcacgcgattttggatgagcac
ggcgtgaactatgatttgcagtggtcgctatcaggtcagccattcttgaccggcgcaggt
cgtttgaccgaagtggcgcaagcggcgattgcggccgaaaccggcgtacaggccgagttg
tctaccaccggtggcacctccgatggccgtttcatcaaagccatcgcgcgcgaattaatc
gaattgggtccgattaatgccagcattcaccaaattgacgaacacgtgaatgtggcggat
attgagcctttatcgcacatttaccaacgcattttgcaacaattggcaacagcataa
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