Vitreoscilla massiliensis: LVJ82_14535
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Entry
LVJ82_14535 CDS
T08422
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
vms
Vitreoscilla massiliensis
Pathway
vms00550
Peptidoglycan biosynthesis
vms01100
Metabolic pathways
vms01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
vms00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LVJ82_14535 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LVJ82_14535 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vms01011
]
LVJ82_14535 (mrdA)
Enzymes [BR:
vms01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LVJ82_14535 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
vms01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
LVJ82_14535 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
UOO88667
UniProt:
A0ABY4DZE0
LinkDB
All DBs
Position
complement(2881702..2883738)
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AA seq
678 aa
AA seq
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MKSLREFRSGKNKQRGQRDFQLRLLVSFVFIIVLCTVLITRFAFLQVNKHQEYVQRATSN
RVSIIPTPPIRGEITDVNGVVLARNYPAYSLEIIPSKINGKFDDLVKQLGRYVVISPDDL
KRYKRFRENSRDYENIPLKLKLTIDEASALAPELYQFPGVEINARTFREYPYGKLTAHVL
GYIGRISTKDVDKLTEDGRQDLYRGTTHIGKLGLEAYYEPQLHGIPGMQEVEKDATGNII
RVLNNTPAQSGQTLRLAMDIRMQQKADELIGNRRGAVVAIDPQTGGVLALVSKPSFDPNL
FIDGIDSDNWKALNENWETPMINRTIQGLYPPGSTFKPFIAMAMLESGKLTQTSIVPAPG
AWSIPGTKHLYRDAARGGHGAVNLQRAITVSSDTFFYRIGYEMGIDKVEPYLKDFDLGQV
TGIDLPNENKGILPSKAWKRERFKKSPKNQEWHPSEMVSISIGQGYNTYTPLQMAHATAI
LANNGIVYRPHVVKELHNHQTQQITVVDPKPERTLPYKQSNIDYVKRGMEGVLRPGGTAW
RVGAGLQYTMAGKTGTAQVKSIAQGAKYNAAALAVQHRDHAWFIAFAPVDKPKIAIAVIL
ENGGWGATAAPIARQLADFYLLKILGQGTAEELSTPQGMTVLADETLISEGSKTSLASLQ
AAFATARQAPQAASGVKP
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctttgcgtgaattccgaagtggcaaaaacaaacaacggggtcaacgtgatttt
caattgcgtttgttggtgtcatttgtctttatcatcgtcttgtgtacggtattgattacc
cgctttgcctttttgcaagtgaacaaacaccaagagtatgtgcaacgtgccaccagcaac
cgggtgtccatcatcccaacgccgccgattcgcggtgaaatcaccgatgtcaatggcgtg
gtgttggcgcgcaattatcctgcgtactcattggaaatcatccccagcaaaatcaatggc
aaattcgatgatttggtcaaacaattggggcggtacgtggtcatcagtcccgatgacttg
aagcgttacaagcgcttccgcgaaaacagccgcgattatgaaaacatcccgttgaagctg
aaactgaccatagacgaagccagcgccttggcaccagagctgtaccaattccccggtgtg
gaaatcaatgcacgtaccttccgtgaatacccgtatggcaagttaaccgcgcatgtgttg
ggctatatcggccgcatctccaccaaagacgtggacaaactaaccgaagacggtcgccaa
gacctgtatcgcggcaccacccacatcggcaaactgggtttagaagcgtattacgaaccg
caattgcacggcatccccggcatgcaagaggtggaaaaagacgccacgggcaacatcatc
cgcgtcttgaacaacaccccggcccaatccggtcaaaccctgcgcttggccatggacatt
cgcatgcagcaaaaagccgatgaattaatcggcaaccgtcgcggcgcagtggtggcgata
gacccgcaaaccggaggcgtgttggccttggtgtccaaaccttcgtttgacccgaatttg
ttcattgacggcatcgacagtgacaactggaaagccttgaacgaaaactgggaaacgccg
atgattaaccgcaccatccaaggcttataccctcccggttcgactttcaaacccttcata
gccatggcgatgctggaaagcggtaaactcacccaaacttctattgtgccagcaccgggt
gcatggagcatccctggtaccaaacatttgtaccgcgatgcggcgcgtggtggtcacggg
gcggtaaatttacaacgggcgattaccgtatcctcggatacattcttctaccgcatcggt
tatgaaatgggcatcgacaaagttgagccgtatttgaaagatttcgatttgggtcaagtc
accggcatagatttgccgaatgaaaacaaaggcattttgcccagcaaagcttggaagcgt
gagcgctttaaaaaatcacccaaaaaccaagaatggcacccatcggaaatggtgtccatc
agcatcggtcaaggttataacacctatacgccgctacaaatggcgcatgctacggcgatt
ttggccaacaatggcatcgtttacaggccgcatgtggtgaaagaattgcacaaccaccaa
acccaacaaatcaccgtggtcgaccccaaaccagaacgcaccttgccatacaagcaaagc
aatattgactatgtcaaacgcggtatggaaggcgtgttgcgccccggtggtacggcgtgg
cgtgtcggcgcgggcttgcaatacaccatggccggcaaaaccggtacggcacaggtgaag
agtattgcccaaggcgcgaaatacaatgccgcagctttggcggtacaacaccgtgaccat
gcttggttcatcgcctttgcaccggtagacaaaccgaaaatcgccatcgcggtgattttg
gaaaacggtggttggggtgcgacagcggcaccgatcgcacgccaattggccgacttttat
ttattgaaaattttggggcaaggcacggccgaagaattgagcacaccgcaaggcatgacc
gtcttggccgatgaaaccttgatttctgaaggcagcaaaacctcgttggcatcgttacag
gccgcatttgccaccgctcgtcaagccccacaagcagcatcaggtgtgaaaccatga
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