Vibrio metoecus: QYQ96_00540
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Entry
QYQ96_00540 CDS
T09673
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
vmt
Vibrio metoecus
Pathway
vmt00300
Lysine biosynthesis
vmt00470
D-Amino acid metabolism
vmt01100
Metabolic pathways
vmt01110
Biosynthesis of secondary metabolites
vmt01120
Microbial metabolism in diverse environments
vmt01230
Biosynthesis of amino acids
Module
vmt_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vmt00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
QYQ96_00540 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
QYQ96_00540 (lysA)
Enzymes [BR:
vmt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
QYQ96_00540 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF1955
Motif
Other DBs
NCBI-ProteinID:
WKY93230
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All DBs
Position
1:111226..112479
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AA seq
417 aa
AA seq
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MDYFNYQDDGQLWAEQVPLADLANQYGTPLYIYSRATLERHWHAFDKSVGDYPHLICYAV
KANSNLGVLNTLARLGSGFDIVSVGELERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKI
KCFNVESEPELHRLNKVAAELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDRAT
EVYRLAHSLPNLDVHGIDCHIGSQLTALAPFIDATDRLLALIDSLKAQGIHIRHLDVGGG
LGVVYRDELPPQPSEYAKALLDRLERHRDLELIFEPGRAIAANAGVLVTKVEFLKHTEHK
NFAIIDAAMNDLIRPALYQAWQDIIPLRPRQGEAQTYDLVGPVCETSDFLGKDRDLVLEE
GDLLAVRSSGAYGFTMSSNYNTRPRVAEVMVDGNKTYLVRQREELSSLWALESVLPE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
ttggattacttcaattatcaggatgatggccagttatgggccgagcaagttccacttgcc
gatttggcaaaccagtacggtacaccactttatatttattcaagagccacgcttgagcgc
cattggcatgcgtttgataagtcagtcggggattacccgcacctgatttgttatgccgtg
aaagccaactctaaccttggtgtattgaatactttagctcgcttaggctctgggtttgat
atcgtttcggtcggtgaattggaacgtgtactggcggcgggcggtgatccgagcaaagtg
gtgttttctggcgttggtaaaaccgaagccgagatgaaacgtgcgctgcaattgaagatc
aaatgctttaatgtggagtcagaacctgaactgcatcgcttgaataaagtcgcggcagaa
ttgggtgtcaaagcgccaatttcactgcgcatcaacccagatgtggatgccaaaacgcac
ccttacatttccactggtttgcgtgataacaaattcggcatcacgtttgatcgcgctaca
gaagtgtatcgcctcgcgcacagcttgccgaatcttgatgtgcacggcattgactgccat
atcggctcgcaactcaccgcgctggctccgtttattgatgcaactgaccgtttgttggcg
ttgattgattcgctcaaagcgcaaggtattcatattcgtcatttggacgttggtggtggc
ttaggcgtagtttatcgtgacgaacttcccccacagccttctgaatacgccaaagccttg
ctggatcgccttgagcgccatcgtgatttggaactgatttttgaaccgggacgcgcgatt
gcggctaacgcaggtgtgctggtgacgaaagttgagtttctcaaacatacggaacacaaa
aacttcgcaatcattgatgcggcgatgaatgatctgattcgtccggcgctgtaccaagcg
tggcaagacatcattccactgcgtccacgccaaggtgaggcacaaacttatgatttggtg
gggccagtgtgtgaaaccagtgacttcttaggcaaagatcgcgacttagtactagaagaa
ggggatttgctggcggtgcgctcttctggtgcgtatggttttaccatgtcttcaaattac
aatactcgtccccgtgttgctgaagtgatggttgatggcaataaaacctacttggtgcgt
caacgagaagaactcagcagtctgtgggcgttggaatcggttttaccagagtaa
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