Vibrio metoecus: QYQ96_00650
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Entry
QYQ96_00650 CDS
T09673
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
vmt
Vibrio metoecus
Brite
KEGG Orthology (KO) [BR:
vmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vmt03021
]
QYQ96_00650 (rpoH)
Transcription machinery [BR:
vmt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QYQ96_00650 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_3
HTH_10
HTH_25
UCR_14kD
ORF6N
VpsR
Motif
Other DBs
NCBI-ProteinID:
WKY93252
LinkDB
All DBs
Position
1:132913..133773
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AA seq
286 aa
AA seq
DB search
MTNQAYPMALVSQDSLDSYIRSVNGYPMLTADEERELAERLHYKEDIEAAKGLILSHLRF
VVHVARGYSGYGLPMADLVQEGNIGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEYVLRN
WRIVKIATTKAQRKLFFNLRKSKKRLGWFNNGEVETVARELGVEPSEVREMESRLAAQDA
AFEMSAEDDENGMAYTAPVLYLEDKHSDLADNLEAENWEAHTTQRLSMALASLDERSQHI
VRARWLDDDNKTTLQDLAEMYGVSAERIRQLEKNAMRKLKEAVGEF
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgactaaccaagcgtatccaatggctcttgtttcccaagacagcttagatagctacatc
cgctcagtaaacggttacccgatgctgactgctgatgaagagcgtgagctggcagagcga
ttacattacaaagaggatatcgaggctgcgaaaggtctgattttgtcgcaccttcgattt
gttgttcacgttgctcgtggttattccggttatggcctgccgatggcggatttggtgcaa
gaaggcaatattggtctgatgaaagcggttaaacgctttaaccctgagatgggagtaaga
ctggtgtcgtttgcggtgcattggattaaagccgaaatccatgaatacgttttgcgtaac
tggcgtattgtgaaaatcgcgacgactaaagcacagcgcaaactgttctttaatctgcgt
aaatcaaaaaaacgccttggctggtttaataacggcgaagttgaaacggtggcgcgcgaa
ttgggtgttgaaccttctgaagtgcgtgaaatggaatctcgtctggcggcgcaggatgct
gcatttgagatgtccgccgaggatgatgaaaacggcatggcctacactgcgccggtgctg
tatctcgaagataagcattctgatttagccgataacctagaagccgaaaactgggaagca
cataccacgcagcgcctcagtatggctctggcgagtcttgatgagcgtagccagcacatt
gtgcgtgctcgttggctggatgatgacaacaaaactacactgcaagatttggccgaaatg
tatggtgtttctgctgagcgtattcgtcagcttgagaaaaacgcaatgcgtaagctgaaa
gaagcggtgggtgagttctga
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