Vibrio metoecus: QYQ96_01105
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Entry
QYQ96_01105 CDS
T09673
Symbol
cytR
Name
(GenBank) DNA-binding transcriptional regulator CytR
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
vmt
Vibrio metoecus
Brite
KEGG Orthology (KO) [BR:
vmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vmt03000
]
QYQ96_01105 (cytR)
Transcription factors [BR:
vmt03000
]
Prokaryotic type
Helix-turn-helix
LacI family
QYQ96_01105 (cytR)
BRITE hierarchy
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_Tnp_ISL3
HTH_38
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
WKY93325
LinkDB
All DBs
Position
1:234059..235108
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AA seq
349 aa
AA seq
DB search
MGSHHRIKTRGSKEMATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYS
PNSLARNLRRNESKTIVAIVPDICDPYFSEIIRGIEDAAMEHGYLVLLGDSGQQKRRENS
FVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDNLTSAFE
AVNYLTQLGHKRVAQISGPQNAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAK
AVRQLLSLPEQPTAIFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLT
TISQPRYEIGRQAMLMMLELLRGHDVRAGSRLLETKLMVRESAAPPNKK
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgggatcccatcaccgaatcaagacaagagggtcaaaagaaatggcgacaatgaaggat
gttgcccagcttgcaggtgtttcaaccgcgacggtgtcgcgtgcgttgatgaatcctgag
aaagtttcttcatcgacgcgtaagcgtgttgaagaggcggtgctggaagcgggttactca
ccgaattctttagcgcgcaatttgcgtcgtaatgagtcaaaaaccatcgttgctatcgtg
ccggatatctgtgatccctacttttctgagatcattcgtgggattgaagatgcggcaatg
gagcacggttatttggtgttattgggtgatagtggccagcaaaagcgtcgggaaaactcc
ttcgttaatctggtgtttaccaaacaagctgacgggatgctgctacttggcacggatttg
ccatttgatgtcagtaaacctgaacagaaaaacctgccgccaatggtgatggcatgtgaa
ttcgcccccgaacttgagctgcctaccgttcacattgataacctgacttcagcgtttgaa
gcagtgaactacttgacccaactggggcataagcgtgtggcgcagatttctggccctcaa
aatgctgcattgtgtcaattccgtcatcaaggctatcaacaggcgctacgtcgtgctggc
atcaccatgaacccgacttactgcacttttggcgatttcacttttgaagccggggcgaaa
gcggtgcgtcagctcttatcgttaccggagcagcctaccgcgattttctgccacaatgac
acgatggcaatcggtgcgattcaggaagcgaagcgacttggcttgcgcgtaccgcaagat
ctgtcggttgtcggttttgatgatattcagtttgcacaatactgcgatcctccattgacg
acgatttctcaacctcgctatgaaattggccgccaagccatgctaatgatgttagaactt
ctgcgtggacacgatgtacgtgccggttctcgtttgttagaaaccaaactcatggtgcgc
gagagtgccgcgccacccaacaagaaatag
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