Vibrio metoecus: QYQ96_02815
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Entry
QYQ96_02815 CDS
T09673
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
vmt
Vibrio metoecus
Pathway
vmt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vmt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QYQ96_02815 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vmt03400
]
QYQ96_02815 (recC)
Enzymes [BR:
vmt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
QYQ96_02815 (recC)
DNA repair and recombination proteins [BR:
vmt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QYQ96_02815 (recC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
WKY93639
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All DBs
Position
1:605754..609200
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AA seq
1148 aa
AA seq
DB search
MFTVYHSNQVETLKILLVHLIKNEPLDDPFIPESILVQSPGMSQWLKMALASELGVAANL
EFPLPATFIWHMFTQVLPDVPQRSAFNKEAMSWRLMELLPKLLDRAEFQPLQRYLQDDED
DSKRFQLAEKIADIFDGYLVYRPDWILSWEAGEEVAEIADQHPWQPILWRELYAYTREQG
HSIYHRANLYQRFIEQLASGDFDRSTWPKRLFIFGISALPPRYIDALRAMGEHIDVHLML
TNPCQHYWGDIRDRKYLARVAAQKRKLLHINGEQVTIGSEVSPLKGDVENYLQESLHLSH
AVGNSLLASMGKMGRDNLYLLAQNDQSELELFIEIQRDSLLHHIQADILHLQEHQDDAKF
ASSGHKPSIAEQDDSLQIALCHSPIREVEVLHDRLLAEFERDPSLKPRDVIVMVPDINAY
APYIQAVFGNAPGERFIPFSISDRSADQESPILTAFLQLLSLPQSRCLASELLELLETPA
IMARFAIDEEEFATAKRWVEEAGIRWGLNSDTGAEFELPASEQNTWQFGIERMLLGYAMP
AEAGLYELGGQWLAPYNQVQGMSAELAGKLAHFVQTLSELRSQLAQTQSMEQWRYWLNEL
LERCFSVDLQGELALKTIRDSLVNLKQQLADAGYQQAISPAIIRQVLTNKLSGTRISQRF
LAGQVNFCTLMPMRSIPFRRVCLLGMNDGVYPPNEMVEGFDLRNVQRRVGDRSRREESRY
LFLEALLSAKEQLYISYVGRSIQDNSERVPSVLVSELLEYCEQNYCLAGDENLESDDSGR
RLVEHLTTQYPMVPFSPQAFIAGSFAREWLPAARRQGQSSADFLTPLSDYLLEVSWPMEL
DLVELQRFWRLPVEYFFKRRLKVSFEPPLAVLEDDEPFALDGLSAYQLRDELVENLLACC
DGAERDQVVAQFAKQQRAQGKLPVAAFGDLELAQSAQQALALAEKIGFLCHQPLEDEEID
LRLQPFADGREVLLRGWLVKRYQSGLVRARSGAIRSEDLLAAWIDHLCLAASGKAVTTHL
IGYERKEGVQHQMLPPLNDAQQAKALLSELVALFCQGMNQPLAYFPKTALACVEAGFSRG
KWQEDEEKSYKKMADTFNDSFYIKGEGGNRYIARIWPQWSDELAKTLRQLAITVLQTPRL
QVQDAEQA
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
gtgtttacggtctaccactccaaccaagttgaaacgctgaagatcctgttggtgcattta
atcaaaaatgagccgttggacgatccctttattcctgagagcattttggtgcaaagcccc
ggtatgtcgcagtggctgaaaatggcgctggccagtgaattaggggttgccgcgaatctt
gagtttcctctaccggcaacctttatctggcatatgtttactcaagtgttgcccgatgtg
ccgcagcgcagcgccttcaataaagaagccatgagttggcgtttgatggagctactgccc
aagctgcttgaccgagccgaattccaaccgctgcaacgctatttacaagacgatgaagac
gactctaagcgcttccaattagcggaaaaaattgccgatattttcgatggttacttggtg
tatcgccccgactggattttaagttgggaagcgggggaagaggtggcggaaatcgctgac
caacacccgtggcagccgattttgtggcgtgaactctacgcttacactcgtgagcaaggg
cattcgatttatcatcgtgctaacctctatcagcgttttattgaacagttggcgagtggc
gattttgatcgcagcacatggcctaagcggttgttcatcttcggtatttccgcgttgccg
ccccgttatattgatgcgctgcgcgcgatgggtgagcatatcgatgtgcacctgatgctg
accaacccttgtcagcactattggggcgacattcgtgaccgcaaatatctggcgcgagtg
gcagcgcaaaaacgcaaactcctgcacattaacggtgaacaagtcaccatcggcagtgaa
gtctcgccgctcaaaggcgatgtggaaaactatctgcaagagtcgttgcacctaagtcac
gcggtgggcaatagcttactggcctcgatgggcaaaatggggcgcgataatctctatctt
ctggcacaaaacgatcagtctgaattagagctgtttattgagattcaacgcgactcgctg
ctgcatcacatccaagcagatattttgcatctgcaagagcatcaagacgatgccaagttt
gccagcagcggccataaaccgagtattgccgagcaggatgattccctgcagattgcccta
tgtcacagcccgattcgtgaagtggaagtgctgcacgaccgactactggccgagtttgag
cgtgaccctagcctgaaaccgcgcgatgtgattgtgatggtgccggacattaacgcctac
gccccttacattcaggcggtgtttggcaacgcgcccggcgagcgttttattccgttttca
atttccgatcgcagcgccgatcaagaaagcccgatcttaaccgccttcttgcaactgctc
tcgctgccgcaatcgcgctgtctggcgtctgaactgcttgagctacttgaaaccccggcg
attatggcaaggtttgcgattgatgaagaagagtttgccactgccaaacgttgggtcgaa
gaagcgggcattcgttggggactcaatagcgacacgggcgcggagtttgaactgcccgcc
agtgaacaaaatacgtggcagtttggcattgaacgtatgttactgggttacgccatgccg
gctgaagcagggttgtatgagcttggcggccagtggcttgccccctataaccaagtgcaa
ggtatgagcgctgagttggctggtaagctcgcgcactttgtgcaaacgctcagcgagctg
cgtagccagcttgcacaaacccaaagcatggagcagtggcgttattggctcaacgaactg
ttggagcgctgttttagtgtcgatctgcaaggtgagctggcgctgaaaaccatccgcgat
agtttggtgaacctaaaacagcagcttgccgatgcgggctatcaacaagcgatttcaccg
gccattattcgccaagtgctgaccaataaactctccggcacgcggatcagccaacgcttt
ttagcgggacaagtgaacttctgtaccctgatgccgatgcgttcgatcccgtttcgccga
gtgtgcctgctcggtatgaatgatggcgtttatccacccaatgaaatggtggaagggttt
gacctgcgtaatgtgcagcgccgagttggcgaccgctcgcggcgtgaagaatcgcgctac
ctgttcctcgaagccttgttgtcagccaaagaacagctttatatcagctatgtcggccgc
tcgattcaagataacagcgagcgcgtgccttcagtgctggtcagtgagcttttggaatat
tgtgagcagaactactgcttggcaggcgatgaaaatctagaaagtgatgactccggacgt
cgcttggttgagcacttaaccacccagtatcctatggtgccgtttagcccgcaggcgttt
atcgctggcagttttgcccgtgaatggctgcctgccgcgcgccgccaagggcagagcagc
gccgattttctcactccactcagtgattatctgctcgaagtgagttggccgatggagctg
gatctggttgagctgcaacgtttttggcgtctgccggtggagtatttcttcaaacgccgc
ttgaaagtgagctttgagccgccgctggctgtgctggaagacgatgagccgtttgctttg
gatggattgagcgcgtatcagctgcgtgatgagttggtggaaaatctgctggcttgctgt
gatggcgcagagcgtgaccaagtggtggcgcagtttgctaagcagcaacgagcgcaaggc
aagttgccagtggcggcgtttggcgatcttgaattggcgcaaagtgcgcagcaagctttg
gcactggcggaaaaaattggctttttgtgtcaccaaccacttgaagatgaagagattgat
ctacgcttgcagccctttgccgatggccgagaagtcttactacgtggttggctcgtgaag
cgttatcaatctggcttggtgcgtgcgcgcagtggcgcgattcgctcggaagatttatta
gccgcatggattgatcatctctgcttggcggcgagcggcaaagccgtcacgacccatttg
attggttatgagcgcaaagaaggagtgcagcaccaaatgctgccaccacttaatgacgcg
cagcaagccaaggcactactgagtgaactggtggcgctgttttgccaaggcatgaaccag
cctttggcttatttcccgaaaacggcgttggcttgcgttgaggcgggattttcccgtggc
aaatggcaggaagatgaagagaagtcctacaagaaaatggcggacaccttcaacgatagc
ttttacatcaagggtgaaggcggtaatcgctacatcgcgcgtatttggccgcagtggagt
gatgaactggcaaaaacgctgcgccaattggccatcacagtgctgcaaacaccgcgttta
caagtgcaagatgccgaacaggcctaa
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